PRGDB00068874 (Gma.10849)
| Gma.10849 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 210143591 (AK286373) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Glycine max |
DNA Sequence
GAGCTCTCACTTCCTTTTGCCACATTACACAAGAACTCTCCAAGGATCCTCCTTCCCACGAAATTCTTTGGTGGGAAAATCCAAGAAGAGGGTGGAATTTCAAGCCAGGGAAGATGGATTATTTCAATGCACCAGGAAGAAACCATCTCTTTGTTCCGGGGCCGGTTAACATCCCGGACCAGATCATTCGGGCCATGAACAGAAACAATGAGGACTACCGTTCTCCAGCAATTCCAGCTATGACCAAAACACTGCTTGAGGATGTCAAGAAGATTTTCAAGACCATAACTGGAATCCCATTTCTCATCCCTACAACTGGTACTGGTGCTTGGGAGAGTGCTCTCACAAACACACTGTCTCCTGGGGATCGAATTGTATCTTTCCTGATTGGCCAATTCAGCTTGCTTTGGATTGATCAGCAGCAACGCCTGAAATTCAATGTTGATGTTGTAGAGAGTGAATGGGGCCAGGGTGCTAAGCTTGATGTTCTGGAATCAAAGATTGCTTCAGATACTTCACACACTATTAAGGCAATTTGCATTGTCCACAATGAGACTGCAACTGGGGTCACCAATGACTTGGCCAAAGTGAGACAAATTCTCGATTCCTACCGGCATCCAGCCCTCCTTATTGTTGATGGAGTGTCTTCTATTTGTGCTCTTGATTTCCGCATGGATGAATGGGGAGTTGATGTGGCAATAACTGGCTCTCAGAAGGCCCTTTCCCTTCCCACTGGGATAGGTATTGTGGTTGCAGGCCCTAGAGCTATTGAGGCCTCAAAACATGCTAAATCACTTCGAGTTTTCTTTGACTGGAAAGACTACCTGAAATTCTACCAGCTAGGAACGTATTGGCCATACACTCCTTCCATACATTTGCTGTATGGTCTGAGAGCTGCTCTTGATCTGATTTTTGAGGAAGGACTTGAAAATGTGATTGCAAGACACAGTCGTTTAGGCAAAGCAACCAGACTTGCTGTAGAGGCATGGGGTTTGAAGAATTGCACCCAAAAGGAAGAGTGGTACAGTGACACTGTGACTGCTGTTCTTGTTCCTGCTTACATTGATAGTACTGAAATAGTTAGAAGGGCATGGAAGAGATACAATTTGAGCTTAGGTCTTGGACTGAACAAAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGTTGCAACTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGATGTGGGCTATCCTGTAAAGCTTGGAAGTGGAGTTGCTGCTGCCAGTGCATACTTACAGGACACTATTCCTATGATCCCTTCCAGGATTTGAGTCACAAGTCATTCTTGTCTTTACTTCCTTTTTTCTGCTCTTTCGGAAATTCTGTAAAATATATATTACCCTCTTTTACACTCCTTTGAAGATGAACATACACTCTACTTTCAGCTTTAATGCATTGCTTCTTTTATTGTCCTGTATATCAAAAATCATTGCATCTTATGATCTTATTTGTCACTGTGTTATGGTCATCAAATTCATCAGCAGCAGGGTTATTGTATTGTATATGGATAAAGAGAAATGCTAGTAACATGCACATTCCCTCCaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Gma.10849 | translated coding region predicted by ESTScan from UniGene Gma.10849 | XALTSFCHITQELSKDPPSHEILWWENPRRGWNFKPGKMDYFNAPGRNHLFVPGPVNIPDQIIRAMNRNNEDYRSPAIPAMTKTLLEDVKKIFKTITGIPFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLKFNVDVVESEWGQGAKLDVLESKIASDTSHTIKAICIVHNETATGVTNDLAKVRQILDSYRHPALLIVDGVSSICALDFRMDEWGVDVAITGSQKALSLPTGIGIVVAGPRAIEASKHAKSLRVFFDWKDYLKFYQLGTYWPYTPSIHLLYGLRAALDLIFEEGLENVIARHSRLGKATRLAVEAWGLKNCTQKEEWYSDTVTAVLVPAYIDSTEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQDTIPMIPSRI |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR21152:SF7 | 39-439 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | MDYFNAPGRNHLFVPGPVNIPDQIIRAMNRNNEDYRSPAIPAMTKTLLEDVKKIFKTITGIPFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLKFNVDVVESEWGQGAKLDVLESKIASDTSHTIKAICIVHNETATGVTNDLAKVRQILDSYRHPALLIVDGVSSICALDFRMDEWGVDVAITGSQKALSLPTGIGIVVAGPRAIEASKHAKSLRVFFDWKDYLKFYQLGTYWPYTPSIHLLYGLRAALDLIFEEGLENVIARHSRLGKATRLAVEAWGLKNCTQKEEWYSDTVTAVLVPAYIDSTEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQDTIPMIPSRI |
| HMMPanther: PTHR21152 | 39-439 | FAMILY NOT NAMED,AMINOTRANSFERASE CLASS V | MDYFNAPGRNHLFVPGPVNIPDQIIRAMNRNNEDYRSPAIPAMTKTLLEDVKKIFKTITGIPFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLKFNVDVVESEWGQGAKLDVLESKIASDTSHTIKAICIVHNETATGVTNDLAKVRQILDSYRHPALLIVDGVSSICALDFRMDEWGVDVAITGSQKALSLPTGIGIVVAGPRAIEASKHAKSLRVFFDWKDYLKFYQLGTYWPYTPSIHLLYGLRAALDLIFEEGLENVIARHSRLGKATRLAVEAWGLKNCTQKEEWYSDTVTAVLVPAYIDSTEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQDTIPMIPSRI |
| superfamily: SSF53383 IPR015424
|
45-415 | PLP-dependent transferases Pyridoxal phosphate-dependent transferase, major d
|
PGRNHLFVPGPVNIPDQIIRAMNRNNEDYRSPAIPAMTKTLLEDVKKIFKTITGIPFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLKFNVDVVESEWGQGAKLDVLESKIASDTSHTIKAICIVHNETATGVTNDLAKVRQILDSYRHPALLIVDGVSSICALDFRMDEWGVDVAITGSQKALSLPTGIGIVVAGPRAIEASKHAKSLRVFFDWKDYLKFYQLGTYWPYTPSIHLLYGLRAALDLIFEEGLENVIARHSRLGKATRLAVEAWGLKNCTQKEEWYSDTVTAVLVPAYIDSTEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILKDVGYPV |
| HMMPfam: PF00266 IPR000192
|
50-361 | Aminotran_5 Aminotransferase, class V/Cysteine desulfurase
|
LFVPGPVNIPDQIIRAMNRNNEDYRSPAIPAMTKTLLEDVKKIFKTITGIPFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLKFNVDVVESEWGQGAKLDVLESKIASDTSHTIKAICIVHNETATGVTNDLAKVRQILDSYRHPALLIVDGVSSICALDFRMDEWGVDVAITGSQKALSLPTGIGIVVAGPRAIEASKHAKSLRVFFDWKDYLKFYQLGTYWPYTPSIHLLYGLRAALDLIFEEGLENVIARHSRLGKATRLAVEAWGLKNCTQKEEWYSDTVTAVLVPAYIDSTEIV |
| Gene3D: G3DSA:3.40.640.10 IPR015421
|
60-295 | no description Pyridoxal phosphate-dependent transferase, major r
|
DQIIRAMNRNNEDYRSPAIPAMTKTLLEDVKKIFKTITGIPFLIPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLKFNVDVVESEWGQGAKLDVLESKIASDTSHTIKAICIVHNETATGVTNDLAKVRQILDSYRHPALLIVDGVSSICALDFRMDEWGVDVAITGSQKALSLPTGIGIVVAGPRAIEASKHAKSLRVFFDWKDYLKFYQLGTYWPYTPSIHLLY |
| PatternScan: PS00595 IPR020578
|
230-250 | AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi
|
VDVAITGSQKALSLPTGIGIV |
| Gene3D: G3DSA:3.90.1150.10 IPR015422
|
296-421 | no description Pyridoxal phosphate-dependent transferase, major r
|
GLRAALDLIFEEGLENVIARHSRLGKATRLAVEAWGLKNCTQKEEWYSDTVTAVLVPAYIDSTEIVRRAWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLLGCLAGVEMILKDVGYPVKLGSGV |
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