PRGDB00070329 (Lja.15822)
| Lja.15822 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 293522996 (FS336755) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Lotus japonicus |
DNA Sequence
GTCTTTCTTCCCCCTGCCAAGTACCAAACAAGTCACTGAGGATTCTCTCTTATCAAAGGTGGTGTTTTGTTGCCTGGGAAAGTTAAAAAACTGCTTGAATTCAAAGAGGTTGAAATTCTAAGCAGGGGAAGATGGACAATGCACCCGGACGACACCATCTGTTTGTTCCAGGGCCTACGAACATCCCTGAACAAGTGATTCGGGCTATGAACCGAAACAATGAGGACTACCGTGCTCCAGCAATACCAGCACTGACAAAAACTCTGCTTGAAGATGTGAAGAAGATTTTCAAGACTAGCACTGGAATCCCATTTCTTTTCCCCACAACTGGCACTGGTGCATGGGAGAGTGCACTGACAAATACCTTATCTCCTGGGGATCGTATTGTATCTTTCCTGATTGGCCAATTCAGCTTGCTTTGGATTGACCAGCAGCAACGCCTCAACTTCAATGTTGATGTTGTGGAAAGTGATTGGGGCCAGGGTGCCAATCTTGATGTTCTGGAATCAAAACTTGCTTCAGATAGAACACACACCATAAAGGCTATTTGCATTGCTCACAATGAGACTGCAACCGGGGTCACCAATAACTTGGCCAAAGTGAGAAAAATTCTCGATGACTACCAGCATCCAGCCCTTCTTATTGTGGATGGAGTGTCTTCCATTTGTGCTCTCGATTTCCGCATGGATGAATGGGGAGTGGATGTGGCCGTGACTGGCTCCCAGAAAGCTCTTTCCCTTCCCACTGGGTTAGGCATTGTCTGTGCAGGTCCTAAAGCCATTGAGGCTTCAAAATCTGCCAAATCACTC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Lja.15822 | translated coding region predicted by ESTScan from UniGene Lja.15822 | MDNAPGRHHLFVPGPTNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKTSTGIPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLASDRTHTIKAICIAHNETATGVTNNLAKVRKILDDYQHPALLIVDGVSSICALDFRMDEWGVDVAVTGSQKALSLPTGLGIVCAGPKAIEASKSAKSL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR21152:SF7 | 1-226 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | MDNAPGRHHLFVPGPTNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKTSTGIPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLASDRTHTIKAICIAHNETATGVTNNLAKVRKILDDYQHPALLIVDGVSSICALDFRMDEWGVDVAVTGSQKALSLPTGLGIVCAGPKAIEASKSAKSL |
| HMMPanther: PTHR21152 | 1-226 | FAMILY NOT NAMED,AMINOTRANSFERASE CLASS V | MDNAPGRHHLFVPGPTNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKTSTGIPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLASDRTHTIKAICIAHNETATGVTNNLAKVRKILDDYQHPALLIVDGVSSICALDFRMDEWGVDVAVTGSQKALSLPTGLGIVCAGPKAIEASKSAKSL |
| superfamily: SSF53383 IPR015424
|
5-224 | PLP-dependent transferases Pyridoxal phosphate-dependent transferase, major d
|
PGRHHLFVPGPTNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKTSTGIPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLASDRTHTIKAICIAHNETATGVTNNLAKVRKILDDYQHPALLIVDGVSSICALDFRMDEWGVDVAVTGSQKALSLPTGLGIVCAGPKAIEASKSAK |
| HMMPfam: PF00266 IPR000192
|
10-221 | Aminotran_5 Aminotransferase, class V/Cysteine desulfurase
|
LFVPGPTNIPEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKTSTGIPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLASDRTHTIKAICIAHNETATGVTNNLAKVRKILDDYQHPALLIVDGVSSICALDFRMDEWGVDVAVTGSQKALSLPTGLGIVCAGPKAIEASK |
| Gene3D: G3DSA:3.40.640.10 IPR015421
|
19-223 | no description Pyridoxal phosphate-dependent transferase, major r
|
PEQVIRAMNRNNEDYRAPAIPALTKTLLEDVKKIFKTSTGIPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQQRLNFNVDVVESDWGQGANLDVLESKLASDRTHTIKAICIAHNETATGVTNNLAKVRKILDDYQHPALLIVDGVSSICALDFRMDEWGVDVAVTGSQKALSLPTGLGIVCAGPKAIEASKSA |
| PatternScan: PS00595 IPR020578
|
190-210 | AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi
|
VDVAVTGSQKALSLPTGLGIV |
List of Contributions
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