PRGDB00070725 (Mdo.171)
| Mdo.171 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 226741648 (GO497488) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Malus x domestica |
DNA Sequence
ATCGAATTCCGTTGCTGTCGGAAAGTGAGAGCTATGGCAACTTACTGTGTTACCGGAGCCACTGGTTTTATAGGGTCTTGGTTGGTGAAGAGCCTCCTGGAGAAAGGCCACATGGTTCATGCCACAGTCCGTGATCCTGCCAAGTGTTTGCACCTATTATCATTGTGGACAAGCATTGACCGGTTGAGATTGCTCCGAGCGGATTTGGGAGAAGAAGGAAGCTTCGACGAGGCTGTGAAGGGCTGTGACGGTGTATTTCACGTTGCAGCATCCATGGAATTCAGTGTTACTGTCAAAGAAAACATTGAGAGTTATGTTCGATCAAATATCATTGAGCCTGCGATCAAAGGAACCTTAGACCTCCTCAAATCCTGTGTGAATTCCGGAACGGTGAAAAGGGTTGTACTCACCTCTTCCATTAGTACTATCACCGCCAAAGACGGAAACGGAAATGCAAGAGTTGTTGTTGATGAGTCTTGCCAAACTCCAGTTGATCAAGTTCTAACTACAAAAGCAAATGGATGGGTTTATGTACTTTTGAAGATTCTCACGGAGGAAGCAGCATTCAAATTTGCAAGTGAGAAAGGGATTAATCTTGTATCAGTCATAACAAGTACTGTTGGGGGGCCTTTTCTCACTTCCAAAGTTCCATCAAGCATTCAAGTTCTTCTTTCTCCAGTAACAGGTGACCCCTGAACTCTATGGCATA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Mdo.171 | translated coding region predicted by ESTScan from UniGene Mdo.171 | IEFRCCRKVRAMATYCVTGATGFIGSWLVKSLLEKGHMVHATVRDPAKCLHLLSLWTSIDRLRLLRADLGEEGSFDEAVKGCDGVFHVAASMEFSVTVKENIESYVRSNIIEPAIKGTLDLLKSCVNSGTVKRVVLTSSISTITAKDGNGNARVVVDESCQTPVDQVLTTKANGWVYVLLKILTEEAAFKFASEKGINLVSVITSTVGGPFLTSKVPSSIQVLLSPVTGDP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF51735 | 12-224 | NAD(P)-binding Rossmann-fold domains | MATYCVTGATGFIGSWLVKSLLEKGHMVHATVRDPAKCLHLLSLWTSIDRLRLLRADLGEEGSFDEAVKGCDGVFHVAASMEFSVTVKENIESYVRSNIIEPAIKGTLDLLKSCVNSGTVKRVVLTSSISTITAKDGNGNARVVVDESCQTPVDQVLTTKANGWVYVLLKILTEEAAFKFASEKGINLVSVITSTVGGPFLTSKVPSSIQVLL |
| HMMPanther: PTHR10366:SF9 | 14-230 | CINNAMOYL-COA REDUCTASE,CINNAMOYL-COA REDUCTASE | TYCVTGATGFIGSWLVKSLLEKGHMVHATVRDPAKCLHLLSLWTSIDRLRLLRADLGEEGSFDEAVKGCDGVFHVAASMEFSVTVKENIESYVRSNIIEPAIKGTLDLLKSCVNSGTVKRVVLTSSISTITAKDGNGNARVVVDESCQTPVDQVLTTKANGWVYVLLKILTEEAAFKFASEKGINLVSVITSTVGGPFLTSKVPSSIQVLLSPVTGD |
| HMMPanther: PTHR10366 | 14-230 | FAMILY NOT NAMED,NAD DEPENDENT EPIMERASE/DEHYDRATASE | TYCVTGATGFIGSWLVKSLLEKGHMVHATVRDPAKCLHLLSLWTSIDRLRLLRADLGEEGSFDEAVKGCDGVFHVAASMEFSVTVKENIESYVRSNIIEPAIKGTLDLLKSCVNSGTVKRVVLTSSISTITAKDGNGNARVVVDESCQTPVDQVLTTKANGWVYVLLKILTEEAAFKFASEKGINLVSVITSTVGGPFLTSKVPSSIQVLLSPVTGD |
| Gene3D: G3DSA:3.40.50.720 IPR016040
|
14-224 | no description NAD(P)-binding domain
|
TYCVTGATGFIGSWLVKSLLEKGHMVHATVRDPAKCLHLLSLWTSIDRLRLLRADLGEEGSFDEAVKGCDGVFHVAASMEFSVTVKENIESYVRSNIIEPAIKGTLDLLKSCVNSGTVKRVVLTSSISTITAKDGNGNARVVVDESCQTPVDQVLTTKANGWVYVLLKILTEEAAFKFASEKGINLVSVITSTVGGPFLTSKVPSSIQVLL |
| HMMPfam: PF01370 IPR001509
|
16-211 | Epimerase NAD-dependent epimerase/dehydratase
|
CVTGATGFIGSWLVKSLLEKGHMVHATVRDPAKCLHLLSLWTSIDRLRLLRADLGEEGSFDEAVKGCDGVFHVAASMEFSVTVKENIESYVRSNIIEPAIKGTLDLLKSCVNSGTVKRVVLTSSISTITAKDGNGNARVVVDESCQTPVDQVLTTKANGWVYVLLKILTEEAAFKFASEKGINLVSVITSTVGGPF |
List of Contributions
There has not been any contribution yet.
