PRGDB00071025 (Mdo.24685)
| Mdo.24685 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 226758634 (GO513605) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Malus x domestica |
DNA Sequence
CGAATTCCGTTGCTGTCGAGCAATGTCCTGCTCTTTGATGACCATGTTGCCAAAATTGCGGACTTCAATTTGTCAAATCAGTCATCGGACACGGCCGCGCGACTGCATTCGACTAGAGTGTTGGGAACGTTTGGCTATCATGCTCCTGAGTATGCGATGACAGGGCAAATTACTCAGAAAAGTGATGTTTACAGTTTTGGAGTTGTTTTACTAGAGCTTTTGACAGGAAGAAAGCCCGTAGACCATACAATGCCAAAGGGGCAACAAAGTCTTGTTACTTGGGCAACTCCAAGACTGAGTGAGGATAAAGTGAAGCAGTGTGTTGATCCCAAGCTAAACAATGACTACCCACCAAAGGCAATTGCTAAGTTGGCAGCAGTAGCAGCACTTTGTGTTCAATATGAAGCTGACTTCAGGCCAAACATGACGATCGTTGTGAAGGCTCTACAGCCACTGCTAAACGCAAAACCTGCAGGCCCAGAGACAAATGCTTAGACATATACTCTACCAAGTACCACATGCATGCATGCAGAATCAGCAACTTGTCTGGTGTACGTGTGATTTGTAACGTATCTTTCTTTTTTGTAATCCTATTCCTGCATTATGCTCCACTGAATCGATTGTCATTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Mdo.24685 | translated coding region predicted by ESTScan from UniGene Mdo.24685 | RIPLLSSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPETNA |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-153 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
RIPLLSSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLL |
| HMMPfam: PF07714 IPR001245
|
5-149 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
LSSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKAL |
| Gene3D: G3DSA:1.10.510.10 | 6-148 | no description | SSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKA |
| HMMPanther: PTHR24420:SF816 | 6-161 | SUBFAMILY NOT NAMED | SSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPE |
| HMMPanther: PTHR24420 | 6-161 | FAMILY NOT NAMED,FAMILY NOT NAMED | SSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPE |
| superfamily: SSF56112 IPR011009
|
6-149 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SSNVLLFDDHVAKIADFNLSNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKAL |
| Seg: seg | 119-130 | seg | KAIAKLAAVAAL |
List of Contributions
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