PRGDB00071034 (Mdo.25117)

Mdo.25117
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	226794013 (GO549388)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Malus x domestica
	Comment?

NP_200638.1| leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] dbj|BAA96921.1| receptor-like protein kinase [Arabidopsis thaliana] gb|AAL576>

DNA Sequence

GCTCGCAttttttttttttttttttccaaatttccaattgcattccaaaaacaagatgacaatgcttaaacagaaaaagaaaagaaaataaaataaaataaaGAGTACTGGATTTTTTTCATGGGGTTTGCACATTAAATTCCGACTCGGAGGATTGCCTAGTTTTGGTGTCGGATTGCCGGAGTTCCTCTATCATTCTGACTACTTCATCCATGTTGGGGCGTGTTTCGGGCAATTTTGTTACGCATGCCAAAGCAATCTGCAGCATCTGCACCATCTCTTCTTCACTGTGTTGCTGTTTTAGAAGTTCCAAATCAAAAACCTCAGCTGTCCACTCCTCACGCACAACAGACTTAACCCAACGCGGGAGATCAACCACGCAGTCATAACCTGGATATTGAAGCGTGGTTTTGCCTGTCAGCATTTCTAAGAGGACCACACCAAAGCTATAGACATCAGATTTGTGAGTGATTTTCCGCATGTCAGTTGCCTCGGGAGCGCGATATCCCATGGCCCGGGACATGGCTGAGAGGGAAGTTCATTAGAGGACTCAACCCTACGTCTGAGATGCAAGCCTCGAGTTCTTGGGTGAGTAGGACGTTTGTGGACTTTATATTGC

Protein sequences

Name	Description	Sequence
Mdo.25117	translated coding region predicted by ESTScan from UniGene Mdo.25117	XQYKVHKRPTHPRTRGLHLRRRVESSNELPSQPCPGPWDIAAPEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRMIEELRQSDTKTRQSSESEFNVQTP

Domains

Domain	Start-End	Description	Sequence
ProfileScan: PS50011 IPR000719	1-147	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	XQYKVHKRPTHPRTRGLHLRRRVESSNELPSQPCPGPWDIAAPEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRMIEEL
HMMPfam: PF07714 IPR001245	25-143	Pkinase_Tyr Serine-threonine/tyrosine-protein kinase	SSNELPSQPCPGPWDIAAPEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRM
Gene3D: G3DSA:1.10.510.10	30-160	no description	PSQPCPGPWDIAAPEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRMIEELRQSDTKTRQSSES
superfamily: SSF56112 IPR011009	42-152	Protein kinase-like (PK-like) Protein kinase-like domain	APEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRMIEELRQSDT
HMMPanther: PTHR24420:SF547	42-149	SUBFAMILY NOT NAMED	APEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRMIEELRQ
HMMPanther: PTHR24420	42-149	FAMILY NOT NAMED,FAMILY NOT NAMED	APEATDMRKITHKSDVYSFGVVLLEMLTGKTTLQYPGYDCVVDLPRWVKSVVREEWTAEVFDLELLKQQHSEEEMVQMLQIALACVTKLPETRPNMDEVVRMIEELRQ

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Analyses

Blast

Blast matches against Reference R-Genes. Show