PRGDB00071198 (Mtr.6064)

Mtr.6064
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	27966031 (AY184243)
Gene Class	Unknown
Domain Type
Gene Species	Medicago truncatula
	Comment?

Medicago truncatula anthocyanidin reductase (BAN) mRNA, complete cds

DNA Sequence

AAAGAGAGTGTGTAAATTAACATTTGATGGCTAGTATCAAACAAATAGAAATAGAAAAGAAGAAGGCATGTGTGATAGGTGGCACTGGTTTTGTGGCATCATTGCTGATCAAGCAGTTGCTTGAAAAGGGTTATGCTGTTAATACTACTGTTAGAGACCTAGATAGTGCAAACAAAACATCTCACCTCATAGCACTGCAAAGTTTGGGGGAACTGAATCTATTTAAAGCAGAATTAACAATTGAAGAAGATTTTGATGCTCCTATATCAGGATGTGAACTTGTCTTCCAACTTGCTACACCTGTGAACTTTGCTTCTCAAGATCCTGAGAATGACATGATAAAACCAGCAATCAAAGGTGTATTGAATGTGTTGAAAGCATGTGTAAGAGCAAAAGAAGTCAAAAGAGTTATCTTAACATCTTCAGCAGCTGCTGTGACTATAAACGAACTCGAAGGGACTGGTCATGTTATGGATGAAACCAATTGGTCTGATGTTGAGTTTTTGAACACTGCAAAGCCACCCACTTGGGGTTATCCTGTTTCAAAAGTACTAGCTGAAAAGGCTGCGTGGAAATTTGCTGAAGAAAATAACATTGATCTAATCACTGTGATACCTACTCTAACAATTGGTCCTTCTCTAACTCAAGATATCCCATCTAGTGTTGCCATGGGAATGTCACTTCTAACAGGCAATGATTTCCTCATAAATGCTTTGAAAGGAATGCAGTTTCTATCGGGTTCAATATCAATTACTCATGTCGAGGATATTTGTCGGGCTCATATTTTTGTGGCAGAGAAAGAATCAACTTCTGGTCGATACATTTGCTGTGCTCACAATACCAGTGTTCCCGAGCTTGCAAAGTTTCTCAGCAAACGATACCCTCAGTATAAAGTTCCAACTGAATTTGATGATTTCCCCAGCAAGGCAAAGTTGATAATCTCTTCTGGAAAGCTTATCAAAGAAGGTTTCAGTTTCAAGCATAGTATTGCTGAAACTTTTGACCAAACTGTGGAGTATTTGAAGACTCAGGGGATCAAGTGAATAAATATATAAATGGAGAGTGAAATATTGTGAACTCCCTAGTGTATCGTCACTTCATTAAATATCTCTCTATTCTAACTATCTATGAGATTGCCATTTCAGTaaaaaaaaaaaaaaaaaa

Protein sequences

Name	Description	Sequence
Mtr.6064	translated coding region predicted by ESTScan from UniGene Mtr.6064	MASIKQIEIEKKKACVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLGELNLFKAELTIEEDFDAPISGCELVFQLATPVNFASQDPENDMIKPAIKGVLNVLKACVRAKEVKRVILTSSAAAVTINELEGTGHVMDETNWSDVEFLNTAKPPTWGYPVSKVLAEKAAWKFAEENNIDLITVIPTLTIGPSLTQDIPSSVAMGMSLLTGNDFLINALKGMQFLSGSISITHVEDICRAHIFVAEKESTSGRYICCAHNTSVPELAKFLSKRYPQYKVPTEFDDFPSKAKLIISSGKLIKEGFSFKHSIAETFDQTVEYLKTQGIK

Domains

Domain	Start-End	Description	Sequence
superfamily: SSF51735	1-334	NAD(P)-bd	MASIKQIEIEKKKACVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLGELNLFKAELTIEEDFDAPISGCELVFQLATPVNFASQDPENDMIKPAIKGVLNVLKACVRAKEVKRVILTSSAAAVTINELEGTGHVMDETNWSDVEFLNTAKPPTWGYPVSKVLAEKAAWKFAEENNIDLITVIPTLTIGPSLTQDIPSSVAMGMSLLTGNDFLINALKGMQFLSGSISITHVEDICRAHIFVAEKESTSGRYICCAHNTSVPELAKFLSKRYPQYKVPTEFDDFPSKAKLIISSGKLIKEGFSFKHSIAETFDQTVEYLKT
HMMPanther: PTHR10366:SF9	1-336	PTHR10366:SF9,CINNAMOYL-COA REDUCTASE	MASIKQIEIEKKKACVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLGELNLFKAELTIEEDFDAPISGCELVFQLATPVNFASQDPENDMIKPAIKGVLNVLKACVRAKEVKRVILTSSAAAVTINELEGTGHVMDETNWSDVEFLNTAKPPTWGYPVSKVLAEKAAWKFAEENNIDLITVIPTLTIGPSLTQDIPSSVAMGMSLLTGNDFLINALKGMQFLSGSISITHVEDICRAHIFVAEKESTSGRYICCAHNTSVPELAKFLSKRYPQYKVPTEFDDFPSKAKLIISSGKLIKEGFSFKHSIAETFDQTVEYLKTQG
HMMPanther: PTHR10366	1-336	PTHR10366,NAD DEPENDENT EPIMERASE/DEHYDRATASE	MASIKQIEIEKKKACVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLGELNLFKAELTIEEDFDAPISGCELVFQLATPVNFASQDPENDMIKPAIKGVLNVLKACVRAKEVKRVILTSSAAAVTINELEGTGHVMDETNWSDVEFLNTAKPPTWGYPVSKVLAEKAAWKFAEENNIDLITVIPTLTIGPSLTQDIPSSVAMGMSLLTGNDFLINALKGMQFLSGSISITHVEDICRAHIFVAEKESTSGRYICCAHNTSVPELAKFLSKRYPQYKVPTEFDDFPSKAKLIISSGKLIKEGFSFKHSIAETFDQTVEYLKTQG
Gene3D: G3DSA:3.40.50.720 IPR016040	12-208	NAD(P)-bd NAD(P)-binding domain	KKACVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLGELNLFKAELTIEEDFDAPISGCELVFQLATPVNFASQDPENDMIKPAIKGVLNVLKACVRAKEVKRVILTSSAAAVTINELEGTGHVMDETNWSDVEFLNTAKPPTWGYPVSKVLAEKAAWKFAEENNIDLITVIPTLTIGPSLTQD
HMMPfam: PF01370 IPR001509	15-265	Epimerase NAD-dependent epimerase/dehydratase	CVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLGELNLFKAELTIEEDFDAPISGCELVFQLATPVNFASQDPENDMIKPAIKGVLNVLKACVRAKEVKRVILTSSAAAVTINELEGTGHVMDETNWSDVEFLNTAKPPTWGYPVSKVLAEKAAWKFAEENNIDLITVIPTLTIGPSLTQDIPSSVAMGMSLLTGNDFLINALKGMQFLSGSISITHVEDICRAHIFVAEKESTSGRY

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Analyses

Blast

Blast matches against Reference R-Genes. Show