PRGDB00071229 (Mtr.7903)
| Mtr.7903 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 83667760 (DW018168) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Medicago truncatula |
DNA Sequence
CGGCCGGGAAGAGCATTTGGCAGTGGCAGTATAGCTCTTCCTTCTGCCATACTTCACCAAACTACCTGAGGTGGTTCTTTGGTGGGAAAAAAAGCAAAGAATTGCTTGAATTTAAAGAGGTTGAAATTTCAAGCAAGGGAAGATGGATTATGTTAATGGACCAGGAAGAAACCATCTCTTTGTTCCAGGGCCGGTTAACATACCAGACCAGGTCATTCGGGCTATGAGCCGAAACAACGAGGACTATCGTTCTCCTGCAATTCCAGCTCTGACAAAAACTCTACTTGAAGATGTCAAGAAGATTTTCAAGACTACTACTGGAACTCCATTTCTTATCCCTACTACTGGTACCGGTGCTTGGGAGAGTGCTCTGACAAACACATTGTCACCTGGAGATCGTATTGTATCTTTCGTGATTGGCCAATTCAGTTTGCTTTGGGTTGATCGGCAGCAACGCCTTAAATTTAATGTCGATGTTGTGGAAAGTGAATGGGGCCGTGGTGCTGATCTCGACATTCTAGAATCAAAACTTGCTTCTGATTCTGCACACACTATAAAGGCTATTTGCATTGTTCATAATGAGACTGCAACTGGGTGTCACCAATAACTTGGCCAAAGTTCGACAACTTTCTCGATGCATACCAACATCCAGCCCTCCTCCTTGTTGATGGAGTGTCATCCCATTTGTGCTCTCGATTTCCGTATGGACGAATGGGGAGTAGATGTGGCCATAACTGGTTCTCAGAAAGCCCTTTCCCTTCCTACTGGTATAGGATTTGTGGTTGCAAGCCCTAAGCCATCGAAGCTTCAAAATCTGCCAATCACTTCGAGTTTTCTTTGATTGGAGTGACTACCTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Mtr.7903 | translated coding region predicted by ESTScan from UniGene Mtr.7903 | MDYVNGPGRNHLFVPGPVNIPDQVIRAMSRNNEDYRSPAIPALTKTLLEDVKKIFKTTTGTPFLIPTTGTGAWESALTNTLSPGDRIVSFVIGQFSLLWVDRQQRLKFNVDVVESEWGRGADLDILESKLASDSAHTIKAICIVHNETATGCHQXLGQSSTTFSMHTNIQPSSLLMECHPICALDFRMDEWGVDVAITGSQKALSLPTGIGFVVASPKPSKLQNLPITSSFL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR21152:SF7 | 1-218 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | MDYVNGPGRNHLFVPGPVNIPDQVIRAMSRNNEDYRSPAIPALTKTLLEDVKKIFKTTTGTPFLIPTTGTGAWESALTNTLSPGDRIVSFVIGQFSLLWVDRQQRLKFNVDVVESEWGRGADLDILESKLASDSAHTIKAICIVHNETATGCHQXLGQSSTTFSMHTNIQPSSLLMECHPICALDFRMDEWGVDVAITGSQKALSLPTGIGFVVASPK |
| HMMPanther: PTHR21152 | 1-218 | FAMILY NOT NAMED,AMINOTRANSFERASE CLASS V | MDYVNGPGRNHLFVPGPVNIPDQVIRAMSRNNEDYRSPAIPALTKTLLEDVKKIFKTTTGTPFLIPTTGTGAWESALTNTLSPGDRIVSFVIGQFSLLWVDRQQRLKFNVDVVESEWGRGADLDILESKLASDSAHTIKAICIVHNETATGCHQXLGQSSTTFSMHTNIQPSSLLMECHPICALDFRMDEWGVDVAITGSQKALSLPTGIGFVVASPK |
| superfamily: SSF53383 IPR015424
|
7-218 | PLP-dependent transferases Pyridoxal phosphate-dependent transferase, major d
|
PGRNHLFVPGPVNIPDQVIRAMSRNNEDYRSPAIPALTKTLLEDVKKIFKTTTGTPFLIPTTGTGAWESALTNTLSPGDRIVSFVIGQFSLLWVDRQQRLKFNVDVVESEWGRGADLDILESKLASDSAHTIKAICIVHNETATGCHQXLGQSSTTFSMHTNIQPSSLLMECHPICALDFRMDEWGVDVAITGSQKALSLPTGIGFVVASPK |
| HMMPfam: PF00266 IPR000192
|
12-218 | Aminotran_5 Aminotransferase, class V/Cysteine desulfurase
|
LFVPGPVNIPDQVIRAMSRNNEDYRSPAIPALTKTLLEDVKKIFKTTTGTPFLIPTTGTGAWESALTNTLSPGDRIVSFVIGQFSLLWVDRQQRLKFNVDVVESEWGRGADLDILESKLASDSAHTIKAICIVHNETATGCHQXLGQSSTTFSMHTNIQPSSLLMECHPICALDFRMDEWGVDVAITGSQKALSLPTGIGFVVASPK |
| Gene3D: G3DSA:3.40.640.10 IPR015421
|
21-221 | no description Pyridoxal phosphate-dependent transferase, major r
|
PDQVIRAMSRNNEDYRSPAIPALTKTLLEDVKKIFKTTTGTPFLIPTTGTGAWESALTNTLSPGDRIVSFVIGQFSLLWVDRQQRLKFNVDVVESEWGRGADLDILESKLASDSAHTIKAICIVHNETATGCHQXLGQSSTTFSMHTNIQPSSLLMECHPICALDFRMDEWGVDVAITGSQKALSLPTGIGFVVASPKPSK |
| Seg: seg | 57-71 | seg | TTTGTPFLIPTTGTG |
| PatternScan: PS00595 IPR020578
|
193-213 | AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi
|
VDVAITGSQKALSLPTGIGFV |
List of Contributions
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