PRGDB00071554 (Nta.3876)
| Nta.3876 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 13924727 (AF252414) |
| Gene Class | RLP |
| Domain Type | LRR, Ser-Thr Kinase |
| Gene Species | Nicotiana tabacum |
DNA Sequence
TTTTCCGGAGATATTCCTAAAGATTTCTTCTCTAAAATGGGATCTCTTaaaaaaatttggttttcaaaaaacaaattttCAGGACCAATTCCTGAATCTTTGGCCAACTTGAAATACTTATTGGAACTTCATCTTGAAAGTAATGAATTTTCAGGTCCTATTCCATCATTTTCACAGGCAAGTTTAACATCTATTGATCTGTCAAACAATAAATTGCAAGGTGAAATTCCTCAAAGCATGTCAAGATTTGGTGCAGACCCTTTTAAAGGGAATAATGAATTATGTGGGAAACAATTAGGGAAAGAATGCAACAAGGGAAAAGAGAATAATACTTTTCAAAGAGCACCAATGTCCAAGCTGAAATGGATAATTCTTGGTTTAGTTGTTAGTCTTCTGTTGATAACGATTCTTTTTAAGGCCAAGCGCAAGGAAGATCATTTCGACAAGCTTGGAAAAGAGAATCTTGACGAGGGGTTGCACGTTTCAAGCTCGAATAGGAAGAACACGAGCATTCATAGTAAGGGAGGTGATTCGGTGCATGGATCATCGCGAAGGGGAGCTGGATCGCAAAGGGGTAAGGCCATGGGCGATCTCGTGTTGGTAAACGAGGAAAAGGGTACGTTCGGATTGCCTGATTTGATGAAGGCAGCTGCTGAAGTCCTTGGGAACGGCGTATTAGGATCAGCTTATAAGGCAAAAATGGTTTATGGACTGTCTGTTGTGGTGAAAAGGTTGAGAGAGATGAATAAAATGAATAGGGATGTCTTTGATACAGAGATCAGGAAAATTAGCAAGTTAAGGCACAAGAATATATTGCAGTTATTGGCATACCATTAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Nta.3876 | translated coding region predicted by ESTScan from UniGene Nta.3876 | FSGDIPKDFFSKMGSLKKIWFSKNKFSGPIPESLANLKYLLELHLESNEFSGPIPSFSQASLTSIDLSNNKLQGEIPQSMSRFGADPFKGNNELCGKQLGKECNKGKENNTFQRAPMSKLKWIILGLVVSLLLITILFKAKRKEDHFDKLGKENLDEGLHVSSSNRKNTSIHSKGGDSVHGSSRRGAGSQRGKAMGDLVLVNEEKGTFGLPDLMKAAAEVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAYHY |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52058 | 1-82 | SSF52058,LRR | FSGDIPKDFFSKMGSLKKIWFSKNKFSGPIPESLANLKYLLELHLESNEFSGPIPSFSQASLTSIDLSNNKLQGEIPQSMSR |
| HMMPanther: PTHR24420:SF823 | 1-279 | PTHR24420:SF823 | FSGDIPKDFFSKMGSLKKIWFSKNKFSGPIPESLANLKYLLELHLESNEFSGPIPSFSQASLTSIDLSNNKLQGEIPQSMSRFGADPFKGNNELCGKQLGKECNKGKENNTFQRAPMSKLKWIILGLVVSLLLITILFKAKRKEDHFDKLGKENLDEGLHVSSSNRKNTSIHSKGGDSVHGSSRRGAGSQRGKAMGDLVLVNEEKGTFGLPDLMKAAAEVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAYHY |
| HMMPanther: PTHR24420 | 1-279 | PTHR24420,FAMILY NOT NAMED | FSGDIPKDFFSKMGSLKKIWFSKNKFSGPIPESLANLKYLLELHLESNEFSGPIPSFSQASLTSIDLSNNKLQGEIPQSMSRFGADPFKGNNELCGKQLGKECNKGKENNTFQRAPMSKLKWIILGLVVSLLLITILFKAKRKEDHFDKLGKENLDEGLHVSSSNRKNTSIHSKGGDSVHGSSRRGAGSQRGKAMGDLVLVNEEKGTFGLPDLMKAAAEVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAYHY |
| Gene3D: G3DSA:3.80.10.10 | 2-82 | G3DSA:3.80.10.10 | SGDIPKDFFSKMGSLKKIWFSKNKFSGPIPESLANLKYLLELHLESNEFSGPIPSFSQASLTSIDLSNNKLQGEIPQSMSR |
| HMMPfam: PF00560 IPR001611
|
61-79 | LRR_1 Leucine-rich repeat
|
SLTSIDLSNNKLQGEIPQS |
| ProfileScan: PS50011 IPR000719
|
215-279 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
KAAAEVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAYHY |
| superfamily: SSF56112 IPR011009
|
216-279 | Kinase_like Protein kinase-like domain
|
AAAEVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAYHY |
| Gene3D: G3DSA:3.30.200.20 | 219-277 | G3DSA:3.30.200.20 | EVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAY |
| HMMPfam: PF07714 IPR001245
|
219-277 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
EVLGNGVLGSAYKAKMVYGLSVVVKRLREMNKMNRDVFDTEIRKISKLRHKNILQLLAY |
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