PRGDB00071620 (Nta.9951)

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Nta.9951
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 126211536 (EF421429)
Gene Class Unknown
Domain Type
Gene Species Nicotiana tabacum

Comment?

Nicotiana tabacum dihydroflavonol 4-reductase (Dfr1) mRNA, complete cds

DNA Sequence

ATGGCAAGTGAAGCTCATGCAGCTGTTCATGCCCCTTCTCCTCCGGCAGCGCCGACAGTTTGCGTCACTGGAGCAGCTGGATTTATTGGCTCTTGGCTTGTCATGAGACTCCTTGAACGTGGTTATAATGTTCACGCTACTGTTCGTGATCCTGAGAACAAGAAGAAGGTAAAGCATCTATTGGAATTGCCAAAAGCTGACACGAACTTAACGTTGTGGAAAGCAGACTTGTCAGTGGAAGGAAGCTTTGATGAAGCCATTCAAGGCTGTCAAGGAGTATTCCATGTGGCAACGCCTATGGATTTCGAGTCCGAGGATCCTGAGAATGAAGTAATTAAACCAACAGTCAGGGGAATGTTAAGCATCATAGAATCATGTGCTAAAGCAAACACAGTGAAGAGGCTGGTTTTCACTTCATCTGCTGGAACTGTCGATGTCCAAGAGCACCAAAAGCTCTTATATGACGAGACCAGCTGGAGTGACTTGGACTTTATATATGCTAAGAAGATGACAGGATGGATGTATTTTGTTTCCCAGATACTGGCAGAGAAGGCCGCAATGGAAGCAGCTAAAAAGAAGAACATCGATTTCATTAGCATCATACCGCCACTGGTTGTTGGTCCATTCCTCGCGCCTACATTCCCACCTAGCTTAATCACTGCCCTTTCACTAATTACTGGGAATGAAGCTCACTACAGCATCATTAAACAAGGTAAATATGTGCATTTGGATGATCTTTGTGAGGCTCATATTTTCCTATATGAGCACCCAAAGGCAGAGGGGAGATTCATCTGCGCGTCCCATCATGCTATCATCTATGATGTGGCAAAGATGGTCCAAGAGAAATGGCCGGAGTACTACGTCCCTACTGAGTTTAAAGGCATCGATAAGGACTTGTCCGTGGTGTATTTTTCGTCAAAGAAGCTGACGGATATGGGGTTTCAATTCAAGTACACTTTGGAGGATATGTATAAAGGGGCCATTGAGACTTGTCGACAGAAGCAGTTGCTTCCCTTTTCTACCCGAAGCACTGCAGATAATGTACGTGACAAAGAAGCCATTCCTCTTTCTACTGAAAACTATGCAAGTGGCAAAGAAAATTCACCAGTTGCAAATGGTACGGGAAAGTCAACCAATGGGGAAATCTAG


Protein sequences

Name Description Sequence
Nta.9951 translated coding region predicted by ESTScan from UniGene Nta.9951

MASEAHAAVHAPSPPAAPTVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLSVEGSFDEAIQGCQGVFHVATPMDFESEDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTVDVQEHQKLLYDETSWSDLDFIYAKKMTGWMYFVSQILAEKAAMEAAKKKNIDFISIIPPLVVGPFLAPTFPPSLITALSLITGNEAHYSIIKQGKYVHLDDLCEAHIFLYEHPKAEGRFICASHHAIIYDVAKMVQEKWPEYYVPTEFKGIDKDLSVVYFSSKKLTDMGFQFKYTLEDMYKGAIETCRQKQLLPFSTRSTADNVRDKEAIPLSTENYASGKENSPVANGTGKSTNGEI

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR10366:SF9
2-357 PTHR10366:SF9,CINNAMOYL-COA REDUCTASE

ASEAHAAVHAPSPPAAPTVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLSVEGSFDEAIQGCQGVFHVATPMDFESEDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTVDVQEHQKLLYDETSWSDLDFIYAKKMTGWMYFVSQILAEKAAMEAAKKKNIDFISIIPPLVVGPFLAPTFPPSLITALSLITGNEAHYSIIKQGKYVHLDDLCEAHIFLYEHPKAEGRFICASHHAIIYDVAKMVQEKWPEYYVPTEFKGIDKDLSVVYFSSKKLTDMGFQFKYTLEDMYKGAIETCRQKQLLPFSTRSTADNVRDKEAIPLS

HMMPanther: PTHR10366
2-357 PTHR10366,NAD DEPENDENT EPIMERASE/DEHYDRATASE

ASEAHAAVHAPSPPAAPTVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLSVEGSFDEAIQGCQGVFHVATPMDFESEDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTVDVQEHQKLLYDETSWSDLDFIYAKKMTGWMYFVSQILAEKAAMEAAKKKNIDFISIIPPLVVGPFLAPTFPPSLITALSLITGNEAHYSIIKQGKYVHLDDLCEAHIFLYEHPKAEGRFICASHHAIIYDVAKMVQEKWPEYYVPTEFKGIDKDLSVVYFSSKKLTDMGFQFKYTLEDMYKGAIETCRQKQLLPFSTRSTADNVRDKEAIPLS

superfamily: SSF51735
18-333 NAD(P)-bd

PTVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLSVEGSFDEAIQGCQGVFHVATPMDFESEDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTVDVQEHQKLLYDETSWSDLDFIYAKKMTGWMYFVSQILAEKAAMEAAKKKNIDFISIIPPLVVGPFLAPTFPPSLITALSLITGNEAHYSIIKQGKYVHLDDLCEAHIFLYEHPKAEGRFICASHHAIIYDVAKMVQEKWPEYYVPTEFKGIDKDLSVVYFSSKKLTDMGFQFKYTLEDMYKGAIETCRQ

Gene3D: G3DSA:3.40.50.720
IPR016040
19-231 NAD(P)-bd
NAD(P)-binding domain

TVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLSVEGSFDEAIQGCQGVFHVATPMDFESEDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTVDVQEHQKLLYDETSWSDLDFIYAKKMTGWMYFVSQILAEKAAMEAAKKKNIDFISIIPPLVVGPFLAPTFPPSLITALSLITGNEAH

HMMPfam: PF01370
IPR001509
20-262 Epimerase
NAD-dependent epimerase/dehydratase

VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLSVEGSFDEAIQGCQGVFHVATPMDFESEDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTVDVQEHQKLLYDETSWSDLDFIYAKKMTGWMYFVSQILAEKAAMEAAKKKNIDFISIIPPLVVGPFLAPTFPPSLITALSLITGNEAHYSIIKQGKYVHLDDLCEAHIFLYEHPKAEGR






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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