PRGDB00073187 (Os.85116)
| Os.85116 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 116010662 (AK241297) |
| Gene Class | N |
| Domain Type | NBS |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
GATCCATCTCTACACATCAGCAATATTTAGCTACACAGAGCTATCTAGGATTAGCTGATCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTGGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCCGGAAGAACATGAAAGCTGAGGATGCTTTCAAGAACCTCCAGGTGGCGATTAAGTGCAAGAACGGCAACGGCGAGTACGAGAGCAAGGCCACTGGAAAGCTCGACGGCACCGGTGCCTTCAGCGTCCCCCTTGACGCCGACCTCCACAGCTCCGACTGCATCGCTCAGCTCCACAGCGCCACCAACGAGCCATGCCCCGGCCAGGAGCCATCCAAGATCGTGCCAATGTCGGAGGGCACCTTTGCTGCCGTCGCCGGCAAGACCCACTACCGATCGGCGTTGTGCGCGTCCGTGACCATCTGCGGCCCAATCAAGAAGAAGATCATAGACCACTTCCACAAGAAGCCGGTGCCACCCAAGCCGGAGCCAAAGCCGGAGCCACCCAAGCCCAAGCCTGAGCCGGAGCACCCATTCCTCGACCACATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCCGTGCCACCCAAGCCTGAGCCTAAGCCCGAGCCCAAGCCGCAGCCTGCGCCAGAGTACCACAACCCTAGCCCTCCGGCGAATTAAGCAATGGAAGTTTGCATGCATGCATGGTTCGTTTGGTTAGTACGTTTGGTGTTGTTGCATATGATTTCCTGTCATGTCAGTTTGTCTGCAGAATAATGGTTTTCTTTGATGCATTAGCTTTTACTCACAAGTTTAATTtgtgtgtgtgtgtCTATTTGTTTGGTATCAGCAAGTAATTAATATAATCAGGGATGTGCATAATATATGTGCAACTTGTTTGATCTCaaaaaaaaaaaaaaaagagcctttggatccaacaccttttttttttttttttttGAGAAAAAAGATGACAGATCTATGATCCGGGCAAAGATGGAATAATACAATGAATCAATGATGATGATGACAGCAACATAAAATAAATTAAAAGTAGATGATCTCAGTGGTACAGTACAAGGGCGGGCAGGCAGCAGCTAGCAGAGTCATATCGTGGGCGTAGCagagagaagaagaagaagaagaaagaaacaaaagaaTCCGAGGCATGGCGATCGCTCAATCATCAAATGTGGTTGGGAGAGTGGTAAAGCCAAAGCCAAAGCTAAGGtccctcctcctcctccctcccGTCCCGTAAAAGAATCGACGAGCAAAATACAGCGCAAAATGTGGTGGGGCGCACCGGCCGCTGCCATCTGCGTCGTCGTCGTTGCTCACGTCGTTGCACGACGCCGTTTTGCTTAGGCGAGGAGGGCGACGAGGCCGAGCGCCACGGCGCACGCCGACGCGATCGCCTGCACGCTGGTCCTCCCTGCGGCTCCCGTGGAGTCGGCGGCGACACCGTCGCcggcggggccgggggcgtcggccgtggacgaggcggcgggggccttagccttcttggagtgcttgggggactcggcgacggcgacgggggccggggcgggggccttggagctcttcttcttcttcttggatggcggggagggcttcttcttcttggccggcgccggcgcgggtgcgtcgggcttggtggggatggtggcgggcgcctcggcggcgggggAAGGAGGCGACGCGACGGGAGCCTCGACCGGGGGAGACGAGGCCGGCGGCGGGGTGGCCTTGGCCGCCTTGGGCGCCGGAGCGGGTGCCTTGGTGGACTTGgtgggtggcgctttggtcggagccggggtggtgggcgcctcggcgggggccggggtggcgggggtggtcggcgccgcggcgggcggggtggaggcggcgggcggggtggtggtggtgggcgccgcggcgggcgcgggcgTCTTCTTGGAGGAGGCCGGTGGCGTGGTGGCCGGCGCCGCGGCGGGGGTGGGGGTCGCCTTCTGCGCGGACGCGGACGCCGCGACGAGGCAGAGCAGCGCGAGGCAGAGTGCGGCTGCGCGCGCCattgcggcggtggtggtttgctcggctcggtgcggcgacggtggtggtggtggtggtggtggGGAGCTGGTTCTATAGTGTCACCTAAATAGAGCTCGAGCTCTATTTAGGTGACACTATAGAACCAGGCCTTGGATCATCCTTACTAATGCTTACAAAGCATACCTTTGAGACAAGGAACATGAAGGTTCTTGAGGACCTCATTGCCCCGGCATTCTTCGCGGATCTTGTGAGCCGGCTCATCGCCTTCCTGATCAGCCGATACAGCAACCGAGCATGCTTCGAGGAGACAGCCATCAAGCTCGAGCTGCTCGTGCTCAAGATCCATGCTGTCATCCAAGAGGCTGAGCATCGTCATATCGCAGGTAACCAGAGTCTTCTCCTGTGGCTCAAGAAGCTCATTAAAGGGATGTACCAAGCATATTATGTGCTTGATAATGCAAGGCACCCCCAAGATGATCAGTACATAAATTCAGTTGTGACCAGTGGCCGGTCAGTTTCCTTGTCTCGTTTCTGCTGCCCTGCCAAGCGACCCCGTACGGTCGCGATGGATTTCCAAGTCAACAACAATGGTAGCATCCATCAGCTAAGTTCCACCCTGGCGTTCTTAGAAGATTATTCTGCAAACTTGAGGGATCTCATTCTGCTTCTGGCATGCTGCCCTCCATTACCAATTAGGCAGCCTGTCAGTGACTTTCTGTCTGATGAGAGAAACATGTTTGGCAGGCTAGTAGAGAGGGAGCAGATCATCAGCTTCCTGATGCAGCCTGGGAACCATCTTGGTGTACTCCCTATAGTTGGTGGTCCAGAGGTTGGAAAGGGCACCATCATCAAGCATGTTTGCAACGATGACAGAGTGCGCAATCGCTTCGACATGATCCTGTACTCCTATGGATCAATTCTTCAGATAAATCCTGCTGATGATGTGTTGGAAACACTAACAAGTCATGGCCACATTCTTCACCAGGCCGATGTTTCAACCTCTTCACTGCACAGGAAGCATCTCATTGTGATAAAAAACACATATGAAGTAGTGATTGACAAGGTAGCATGGGCTACACTCTGTGCTTCTCTAAGATCAATTGGAAATGGAAGCAAGATCATAATAGTCAGCGAGAATGACAACATCAAAGATCTTGGTACGACGGGAGCGATGCGGATCGATCCATTACTCCAAGAGGAATACTGGTACTTCTTCAGGTCACTTGCCTTTGGTTCAGGTTCTAGCATTCTAGAGGAGCATGCAGGGCTCGCTGTGGTTGGCAGACAAATTGCAGCAGAACTTCATGGCTCATTGTTTGGAGCCAAGGTACTCGGTAGGTTTCTAAGGGCAAACCTTGATGAACAGTTTTCGCACACTATGCTTAACACCGTGTACAGATTCCATGAAGTGATGCAACGTGACAAGTATTTCACCAAGCTCAGCATCGCTCGTGTGGCTCTGAAGGTGCTTCCAATGCCTCTTAGGCTAAAGAGTGCTTCTCAGACCGGCGAGGCTTCAGAGATGCCTGGCACTATGGTTCAAGAACTAGTTGCCGGCAGCGTTCTTCCTGTAGAGAAAGAGATGGAGGTTGTGCTGTGGGAGTCTGCCTACCAGCCGAGTTACCGCTACACCGTTGTTTGTGAGAGAGTTGAGAAGCCTCGTTGCAGTGCAACCAAACGAATGAAGCAGAAGTAAATGATCAATAGTGATTCCCTTTGGTCATGAAAACAAGTTATTTTCAACATTTCTCCGGTCAAACTTTCAAGTTTGAATATCATACTTGTTAAATTTATAGACTTGATGTATGAATGAAAATTATTGTTGGTATTTATTACGGTCATAGATAAATCAGCAAGCACAC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Os.85116 | translated coding region predicted by ESTScan from UniGene Os.85116 | MAIAQSSNVVGRXGKAKAKAKVPPPPPSRPVKESTSKIQRKMWWGAPAAAICVVVVAHVVARRRFAXARRATRPSATAHADAIACTLVLPAAPVESAATPSPAGPGASAVDEAAGALAFLECLGDSATATGAGAGALELFFFFLDGGEGFFFLAGAGAGASGLVGMVAGASAAGEGGDATGASTGGDEAGGGVALAALGAGAGALVDLVGGALVGAGVVGASAGAGVAGVVGAAAGGVEAAGGVVVVGAAAGAGVFLEEAGGVVAGAAAGVGVAFCADADAATRQSSARQSAAARAIAAVVVCSARCGDGGGGGGGGELVLSVTXIELELYLGDTIEPGLGSSLLMLTKHTFETRNMKVLEDLIAPAFFADLVSRLIAFLISRYSNRACFEETAIKLELLVLKIHAVIQEAEHRHIAGNQSLLLWLKKLIKGMYQAYYVLDNARHPQDDQYINSVVTSGRSVSLSRFCCPAKRPRTVAMDFQVNNNGSIHQLSSTLAFLEDYSANLRDLILLLACCPPLPIRQPVSDFLSDERNMFGRLVEREQIISFLMQPGNHLGVLPIVGGPEVGKGTIIKHVCNDDRVRNRFDMILYSYGSILQINPADDVLETLTSHGHILHQADVSTSSLHRKHLIVIKNTYEVVIDKVAWATLCASLRSIGNGSKIIIVSENDNIKDLGTTGAMRIDPLLQEEYWYFFRSLAFGSGSSILEEHAGLAVVGRQIAAELHGSLFGAKVLGRFLRANLDEQFSHTMLNTVYRFHEVMQRDKYFTKLSIARVALKVLPMPLRLKSASQTGEASEMPGTMVQELVAGSVLPVEKEMEVVLWESAYQPSYRYTVVCERVEKPRCSATKRMKQK |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 9-32 | seg | VVGRXGKAKAKAKVPPPPPSRPVK |
| Seg: seg | 46-80 | seg | APAAAICVVVVAHVVARRRFAXARRATRPSATAHA |
| Seg: seg | 96-109 | seg | SAATPSPAGPGASA |
| Seg: seg | 123-307 | seg | LGDSATATGAGAGALELFFFFLDGGEGFFFLAGAGAGASGLVGMVAGASAAGEGGDATGASTGGDEAGGGVALAALGAGAGALVDLVGGALVGAGVVGASAGAGVAGVVGAAAGGVEAAGGVVVVGAAAGAGVFLEEAGGVVAGAAAGVGVAFCADADAATRQSSARQSAAARAIAAVVVCSARC |
| Seg: seg | 308-317 | seg | GDGGGGGGGG |
| Seg: seg | 509-521 | seg | LILLLACCPPLPI |
| HMMPfam: PF00931 IPR002182
|
543-750 | NB-ARC,NBS NB-ARC
|
EQIISFLMQPGNHLGVLPIVGGPEVGKGTIIKHVCNDDRVRNRFDMILYSYGSILQINPADDVLETLTSHGHILHQADVSTSSLHRKHLIVIKNTYEVVIDKVAWATLCASLRSIGNGSKIIIVSENDNIKDLGTTGAMRIDPLLQEEYWYFFRSLAFGSGSSILEEHAGLAVVGRQIAAELHGSLFGAKVLGRFLRANLDEQFSHTM |
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