PRGDB00073198 (Os.86079)
| Os.86079 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 112785428 (EE590664) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Oryza sativa Japonica Group |
DNA Sequence
CATTCGGATGGAGGAGATAGAAGGTAATTTGCTGGAGTCCTCGATTGGATGGCTGGCGGATACCATAGTGGAGAACCTGGGCAACGACAAGTTTGGCGCGTGGATTAGCCAGGTCGGGCTCGCCGATGACACCGAAAAGCTCCGGTCTGAGGTCGAGAGGGTGGAGGTGGTGGTCGGTGCTGTCAAGGGGAGGGCGATCGCGAACAAACCGCTGGCCCGATCACTCGGTCGTCTAAGGGAGGTGCTGTACGACGCCGACGACGCGGTCGACGAGCTCGAATACTACAGGCTCCAGCATCAGCTCCAAGGAGATTCATGCGCGGATGAACATGGAGTAGAGCAAGCAGCGAGACCGAGTTGCAACGCTGGCATAGCAAGTAGCAGTGGTGGCAAAAAACGATCCAAGGCTTGGGAGGACTTCGATATCACGGAAAAGGAAAACGGAAAGGCGGTGAAGGCCAGATGTATCCACTGTCACACGGTGGTCAAGTGCGGTTCCGACAAAGGGACGTCAGTTTTACACAACCATCTGAAGAGTGACAATTGTAAGAAGAAACGTGAAGCAATTGGTCCGCCACCAGACCCTTCCAGGTATACTACCAAATCTGTGAATGATAGCTAAAAAGAGACACCATACTGCC
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Os.86079 | translated coding region predicted by ESTScan from UniGene Os.86079 | XIRMEEIEGNLLESSIGWLADTIVENLGNDKFGAWISQVGLADDTEKLRSEVERVEVVVGAVKGRAIANKPLARSLGRLREVLYDADDAVDELEYYRLQHQLQGDSCADEHGVEQAARPSCNAGIASSSGGKKRSKAWEDFDITEKENGKAVKARCIHCHTVVKCGSDKGTSVLHNHLKSDNCKKKREAIGPPPDPSRYTTKSVNDS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 52-66 | seg | VERVEVVVGAVKGRA |
| Seg: seg | 123-137 | seg | AGIASSSGGKKRSKA |
| ProfileScan: PS50808 IPR003656
|
132-190 | ZF_BED Zinc finger, BED-type predicted
|
KKRSKAWEDFDITEKENGKAVKARCIHCHTVVKCGSDKGTSVLHNHLKSDNCKKKREAI |
| HMMSmart: SM00614 IPR003656
|
132-186 | BED zinc finger Zinc finger, BED-type predicted
|
KKRSKAWEDFDITEKENGKAVKARCIHCHTVVKCGSDKGTSVLHNHLKSDNCKKK |
| superfamily: SSF57667 | 135-193 | C2H2 and C2HC zinc fingers | SKAWEDFDITEKENGKAVKARCIHCHTVVKCGSDKGTSVLHNHLKSDNCKKKREAIGPP |
| HMMPfam: PF02892 IPR003656
|
135-183 | zf-BED Zinc finger, BED-type predicted
|
SKAWEDFDITEKENGKAVKARCIHCHTVVKCGSDKGTSVLHNHLKSDNC |
List of Contributions
There has not been any contribution yet.
