PRGDB00073534 (Pgl.1445)
Pgl.1445 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 157620768 (EX421850) |
Gene Class | T |
Domain Type | TIR, LRR |
Gene Species | Picea glauca |
DNA Sequence
GGGGGATCACACTGAGCCAGGCCCAAGCCTCCTTGCTCTCCTTCTCAGCCCAGGCGATCATGATCACCTTCCGCTCTCCCCATCTTCGCCCCACTCTACCCGCTCTCCCAATCTTCATCGTTGAGTATGTGGGGAGGACGCCTGTGCGCCTCCCTTCACGGGGCGTTTCCAATAGACTCCTGGAAGAGTCGGCTGCTTCAATTCCAATCGCGATTGCAATGGAATTAGGAAGGAGCAGACACAGGAAATTCAAAATATACGACGTGTCTCTGAGCTTCAAAGGACGCGATGTGAGGAGAGGCTTTGCCGATCATCTCTACAACGCCCTCACCAGGGGGGGTTTGCACGAATTCCTTGACACCCACCAAATCAATGGGGGAGAGGACATCTCTGCAAGCTTACAAAACGCAGTTGAGGTGAGTCGCATCCTGATTGCACAATCTGCCTGGTGCCTCAGGGAAGCCTTCCTGATCGCGCAGCAAGTACTACTTCAAGGGAAGGAGGAGTCGACCATCGCCATTCCTCTATTTCACAGCGTGACTCCTGAGCTAAAGAAATTGGTGATTGGAAGGATTGTGTCTTCCAACATTGCCGTCTATCTGAGTGGTCACTCCAAGAAGACACGAATAGGAGGTTAACTAATTCTTCGCTGCTCTGTTGCTTTTTATTTATTTATTCGTATACATGTTTTGTTTATCTAAATCACACTGTTTGTGCGTTTGTATGGGTGTACTGTTTGTGCGTTTGTATGGGTGTAGATCGATTAATAAGTGTTGTGTATATGAAAGGAAATGTTTGTATTGGTTTAGATTGATTAATAAATGTCGTATATATGAAAGGAAATTTGTAAATGGAAGTTTACAATTTAATTCTCGGACTGAGGGCTGCGTGGATGCACCTA
Protein sequences
Name | Description | Sequence |
---|---|---|
Pgl.1445 | translated coding region predicted by ESTScan from UniGene Pgl.1445 | XGITLSQAQASLLSFSAQAIMITFRSPHLRPTLPALPIFIVEYVGRTPVRLPSRGVSNRLLEESAASIPIAIAMELGRSRHRKFKIYDVSLSFKGRDVRRGFADHLYNALTRGGLHEFLDTHQINGGEDISASLQNAVEVSRILIAQSAWCLREAFLIAQQVLLQGKEESTIAIPLFHSVTPELKKLVIGRIVSSNIAVYLSGHSKKTRIGG |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
Seg: seg | 5-19 | seg | LSQAQASLLSFSAQA |
Seg: seg | 64-73 | seg | SAASIPIAIA |
superfamily: SSF52200 IPR000157
|
75-182 | Toll/Interleukin receptor TIR domain Toll-Interleukin receptor
|
ELGRSRHRKFKIYDVSLSFKGRDVRRGFADHLYNALTRGGLHEFLDTHQINGGEDISASLQNAVEVSRILIAQSAWCLREAFLIAQQVLLQGKEESTIAIPLFHSVTP |
ProfileScan: PS50104 IPR000157
|
85-145 | TIR Toll-Interleukin receptor
|
KIYDVSLSFKGRDVRRGFADHLYNALTRGGLHEFLDTHQINGGEDISASLQNAVEVSRILI |
Gene3D: G3DSA:3.40.50.10140 | 85-183 | no description | KIYDVSLSFKGRDVRRGFADHLYNALTRGGLHEFLDTHQINGGEDISASLQNAVEVSRILIAQSAWCLREAFLIAQQVLLQGKEESTIAIPLFHSVTPE |
HMMSmart: SM00255 IPR000157
|
86-207 | Toll Toll/interleukin-1 receptor homology (TIR) domain
|
IYDVSLSFKGRDVRRGFADHLYNALTRGGLHEFLDTHQINGGEDISASLQNAVEVSRILIAQSAWCLREAFLIAQQVLLQGKEESTIAIPLFHSVTPELKKLVIGRIVSSNIAVYLSGHSKK |
HMMPfam: PF01582 IPR000157
|
91-186 | TIR Toll-Interleukin receptor
|
LSFKGRDVRRGFADHLYNALTRGGLHEFLDTHQINGGEDISASLQNAVEVSRILIAQSAWCLREAFLIAQQVLLQGKEESTIAIPLFHSVTPELKK |
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