PRGDB00073552 (Pgl.2627)

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Pgl.2627
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 49061251 (CO238934)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Picea glauca

Comment?

WS00723.B21_E15 WS-PS-N-A-8 Picea glauca cDNA clone WS00723_E15 3', mRNA sequence

DNA Sequence

ttttttttttttttttttAGACCaatattctaattgcattaataaaggttctatctaagtcacattatatagccaaatacttgcatttaatgctgattacaataatagaggttatatgtaagtcacactatataaaccaaagtgcgattcaacctgaaagaaagaggaatggagacatttgtgtgcagtcacttgcatttccaggaaggaagaataactatttaaaccagatgcgacgcttattgaatgaaagccatatatacatatggggtctgtgccatgcggttctaccaattttcaaaatccttaaaggatctgagcgaccaacttctctaacgatgcctcgacctctctcattgtcggtcgctgctgccacgcttctctgctgcacatcatacctatctctgccaacgaaacaacaattccatttcccttgattgcattcctcgtttcacttaaatcatgtgactcatgttcatcttcttcttcctgtgtaatctcttccaccagatccctgtcaatcacctccAACAATCTGTCGGGGAATGCATCGCCCACCCAACTCTGCAATGTCGAACATGATTGCCCTTCTTGTGAGAACACTGGGTCTGTGGGTCTCTTTCCCGTTATCGTTTCCAACGCCAAGATGCCGTAGCTGTATACGTCCCCTTTCAGAGACAGGCGCCCCGCTATACCATATTCTGGTGCAATGTAACCAATAGATCCTATGACAGTGCTTGAGGTGTCTCCTAATCCTGCTGTTGAATCGTCCTGCGCTGCTGCCGAGATCATCAGACGTGAAATACCGAAATCTCCCACATGGGCCGTCATCATCTCAT


Protein sequences

Name Description Sequence
Pgl.2627 translated coding region predicted by ESTScan from UniGene Pgl.2627

XEMMTAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVEASLEKLVAQIL

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-177 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

XEMMTAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVEASLEKLVAQIL

HMMPfam: PF07714
IPR001245
4-168 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase

MTAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVEAS

superfamily: SSF56112
IPR011009
4-175 Protein kinase-like (PK-like)
Protein kinase-like domain

MTAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVEASLEKLVAQ

HMMPanther: PTHR24420:SF474
4-171 SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED

MTAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVEASLEK

HMMPanther: PTHR24420
4-171 FAMILY NOT NAMED,FAMILY NOT NAMED

MTAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVEASLEK

Gene3D: G3DSA:1.10.510.10
5-166 no description

TAHVGDFGISRLMISAAAQDDSTAGLGDTSSTVIGSIGYIAPEYGIAGRLSLKGDVYSYGILALETITGKRPTDPVFSQEGQSCSTLQSWVGDAFPDRLLEVIDRDLVEEITQEEEDEHESHDLSETRNAIKGNGIVVSLAEIGMMCSREAWQQRPTMREVE

Seg: seg
113-131 seg

EEITQEEEDEHESHDLSET






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Analyses

Blast

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