PRGDB00073850 (Pgl.22771)
| Pgl.22771 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 157504694 (EX305925) |
| Gene Class | Unknown |
| Domain Type | |
| Gene Species | Picea glauca |
DNA Sequence
TTTTTTCGAGTTGGATATTACGCTCATAAAGAAGCTATTTATCATTGTGGCATACACGCACAAAATCAGAAGAAACCCATTTTGTGTCAACAACCGCTTCGAGGAGTGAGCTGGCAAGCGACGTAAAACTCTGTATACGAGAGCAATAATGTCAAACTTTCCCAAGAGAAAGCGACACAAACAGACAAGAGTTGGTGTATCTTTCCATCATTATCATCGTCATTCTACGCCTCACCAGGGCGCTTTGAATTACAAGACACAATCTTGATCTTGTCGGTCGTAACGCTGGGTGTATTTCCACCCTGCTGCTGAAATTTGAAGGTGACATTTTTGATGAGGAAAGTCCACACCTCGTCGCAGAAACGGTATGTATCGAGGTTTCCCTTGAAGGTCAAGTTTGCCTTGACCTTCTCCGACAGCACTTCGGTGACATGCCTATCAAAGTTGTTGAGGATTTTCATAGCCAACTGTGGTGCGATGCGGCCCTCGGAAATCAAATCATCGAGCGCATCAGTAAGTGCCATACCAATCGAGGATCGCCTGTAAAGCTCATAGTATGGATTCTGAGGTGTTGCCATCTTATCGAATGGTATATTCGCGGTGGATAAGTGTTGCGTATTTCAGCAGTGAGCTTGATGAATCTCTAGTAATGGTTTGCGAGATGGATGATCAATGAGCTGCTAGCCTTAAGCGATGGAGAACTGACTCAGTGTATAAAATGAACTTCGGTTCGCTAAGTTCAGAATGT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Pgl.22771 | translated coding region predicted by ESTScan from UniGene Pgl.22771 | MATPQNPYYELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVLSEKVKANLTFKGNLDTYRFCDEVWTFLIKNVTFKFQQQGGNTPSVTTDKIKIVSCNSKRPGEA |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPIR: PIRSF009415 IPR003194
|
4-117 | Transcription initiation factor IIA, gamma subunit Transcription initiation factor IIA, gamma subunit
|
PQNPYYELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVLSEKVKANLTFKGNLDTYRFCDEVWTFLIKNVTFKFQQQGGNTPSVTTDKIKIVSCNSKRPGEA |
| Gene3D: G3DSA:1.10.287.190 IPR015872
|
6-59 | no description Transcription initiation factor IIA, gamma subunit
|
NPYYELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVLSEKVK |
| HMMPanther: PTHR10966 IPR003194
|
7-116 | TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 Transcription initiation factor IIA, gamma subunit
|
PYYELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVLSEKVKANLTFKGNLDTYRFCDEVWTFLIKNVTFKFQQQGGNTPSVTTDKIKIVSCNSKRPGE |
| HMMPfam: PF02268 IPR015872
|
8-55 | TFIIA_gamma_N Transcription initiation factor IIA, gamma subunit
|
YYELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVLS |
| BlastProDom: PD009224 IPR015872
|
8-54 | Q4WZV0_ASPFU_Q4WZV0; Transcription initiation factor IIA, gamma subunit
|
YYELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVL |
| superfamily: SSF47396 IPR009083
|
9-59 | Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA, helical
|
YELYRRSSIGMALTDALDDLISEGRIAPQLAMKILNNFDRHVTEVLSEKVK |
| HMMPfam: PF02751 IPR015871
|
57-111 | TFIIA_gamma_C Transcription initiation factor IIA, gamma subunit
|
KVKANLTFKGNLDTYRFCDEVWTFLIKNVTFKFQQQGGNTPSVTTDKIKIVSCNS |
| superfamily: SSF50784 IPR009088
|
57-112 | Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA, beta-barrel
|
KVKANLTFKGNLDTYRFCDEVWTFLIKNVTFKFQQQGGNTPSVTTDKIKIVSCNSK |
| Gene3D: G3DSA:2.30.18.10 IPR009088
|
62-116 | no description Transcription factor IIA, beta-barrel
|
LTFKGNLDTYRFCDEVWTFLIKNVTFKFQQQGGNTPSVTTDKIKIVSCNSKRPGE |
List of Contributions
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