PRGDB00073971 (Ppa.129)
| Ppa.129 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 33591209 (AY339068) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Physcomitrella patens |
DNA Sequence
ACTTCTATGGCATCTTCTACTGCCGGTGCTGTTAGTGGCACAAATATGATAGGAGGTGGAAGAGCGGCTCCAACTAAAGCAGGTTCTAGTGGCGTGGAGTTATTACCCAAAGAGATGCACGAGATGAAGCTAAGGGATGATAAGGTTGACCACGGCGATGATAAGGAGATTGAAGCAACAGTAGTTGATGGAAATGGCACCGAGACAGGCCACATCATAGCTACCACTATTGGAGGACGCAATGGCCAACCGAAGCAGACCATCAGTTACTCGGCGGAACGTGTTGTAGGTACAGGATCGTTTGGGATCGTGTTTCAGGCTAAATGCATTGAGAGCGGGGAGACGGTGGCCATAAAGAAGGTGCTCCAAGACAAGAGATACAAGAATCGAGAGCTCCAGATCATGAGGCTATTGGATCATCCTAATATTGTAGCTCTGAAGCACTGCTTCTTTTCTACAACTGAGAAGGATGAGCTGTATTTGAACTTGGTTCTGGAGTACGTCCCGGAGACGGTTTATCGTATTGCAAAGCACTACAATCGTATGAACCAGAGAATGCCGCTGGTTTATGTGAAGCTGTACACTTATCAGATATGCCGGTCACTGGCGTACATTCACAGCGGCATTGGAGTATGCCATCGTGATATCAAGCCCCAGAACCTGCTGGTGAATCCCCACACGCATCAGCTAAAGCTATGCGACTTTGGAAGTGCGAAAGTTTTGGTGAAAGGGGAGCCTAATATTTCGTACATTTGTTCACGATATTACCGTGCTCCCGAGCTGATATTTGGAGCTACAGAATACACAACTGCGATTGACATATGGTCGATGGGTTGCGTGATGGCGGAACTTCTCCTAGGACAGCCTTTGTTCCCTGGAGAAAGCGGAGTTGATCAATTGGTGGAGATCATCAAGGTGTTAGGGACACCTACACGTGAGGAGATAAAGTGCATGAATCCGAACTACACGGAGTTCAAGTTTCCTCAAATTAAGGCTCACCCGTGGCACAAGGTTTTCCACAAACGCATGCCTTCAGAAGCAGTGGACCTGGTTTCAAGACTGCTACAGTACTCCCCAAATCTGCGGTGCAACGCTTTGGAAGCTTGCGTGCATCCGTTTTTTGACGAGCTTCGGGACCTCAACTGCCGTTTACCAAATGGGCGGCCACTTCCCCCGTTGTTCAACTTCAAACCTCAAGAGTTGAAAGGTGCTACTCCTGAGATTCTGCAACGGTTGATACCTGAGCATGCAAGGAAGCAAAACCCGATGCTCGCGTTGTAAGCGCTGGTTTGGAGGCAATTGAAAGGCCTTGTTTTTAAGGGGTTTCCCTGCTTAGAGAACCGGGCAACTATGTGCACAGACATAGTTGAAATTGCGTCTTTTCTGGTTTGATAGCATTCGGTGCCCAGTCTGATTAGGTCCCCTGCTTTTCATACGCTGTGTAAGGGAGACAGAGTAGACTTTAAGCATGTCGCTGTTACGGACAGGTAAATATGGGAGAGTACAGTGTGCATGCATGTCTATGCCAGGTGCGCATGTAAGTGTATCCTAATGTTTCTGGGAGTGCATTGAGGTGCGCGGCAATTGGAAGGGTAAGGAGCGGAGATATTAGGTGTAGAGAGGCTCAGTCGGGCTGTTACATATAGGGGCCCGGCTGGTGCTAGAAGTTAGCGAGTTAAACGGAACGTTGTTATTTAGGAGCAGAAGTAGAATGTAATTTGGGTAGAAGATGGAAGTTCGAAATGTGATTTTATCATCCGGATATTTGTATACTCTGCNTGGGTGGAGAATGCCCTATGTGTACTCCTAAAATCCTCCNCGANGGTCTCCCAGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ppa.129 | translated coding region predicted by ESTScan from UniGene Ppa.129 | TSMASSTAGAVSGTNMIGGGRAAPTKAGSSGVELLPKEMHEMKLRDDKVDHGDDKEIEATVVDGNGTETGHIIATTIGGRNGQPKQTISYSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFFDELRDLNCRLPNGRPLPPLFNFKPQELKGATPEILQRLIPEHARKQNPMLAL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24057 | 6-421 | FAMILY NOT NAMED,GLYCOGEN SYNTHASE KINASE-3 ALPHA | STAGAVSGTNMIGGGRAAPTKAGSSGVELLPKEMHEMKLRDDKVDHGDDKEIEATVVDGNGTETGHIIATTIGGRNGQPKQTISYSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFFDELRDLNCRLPNGRPLPPLFNFKPQELKGATPEILQRLIPEHARKQN |
| Gene3D: G3DSA:3.30.200.20 | 84-165 | no description | PKQTISYSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVL |
| superfamily: SSF56112 IPR011009
|
89-405 | Protein kinase-like (PK-like) Protein kinase-like domain
|
SYSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFFDELRDLNCRLPNGRPLPPLFNFKPQELKGAT |
| ProfileScan: PS50011 IPR000719
|
90-374 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFF |
| HMMSmart: SM00220 IPR002290
|
90-374 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFF |
| HMMSmart: SM00219 IPR020635
|
90-374 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YSAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFF |
| HMMPfam: PF00069 IPR017442
|
91-374 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
SAERVVGTGSFGIVFQAKCIESGETVAIKKVLQDKRYKNRELQIMRLLDHPNIVALKHCFFSTTEKDELYLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFF |
| PatternScan: PS00107 IPR017441
|
96-120 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
VGTGSFGIVFQAKCIESGETVAIKK |
| Gene3D: G3DSA:1.10.510.10 | 166-378 | no description | EYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHSGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCNALEACVHPFFDELR |
| PatternScan: PS00108 IPR008271
|
211-223 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VCHRDIKPQNLLV |
List of Contributions
There has not been any contribution yet.
