PRGDB00073977 (Ppa.441)
| Ppa.441 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 28172865 (AJ515321) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Physcomitrella patens |
DNA Sequence
GAATTCGGCACGAGCGCCAGCCAGCCTCGTATCTGACTGCCTTGTCGCGCGTGCCCCCTTGTGACGCATCTTCGTGCCTCACTAAGAAGCCCTCCCGGATTGTCCTGTCTTCATTCGTGCCTACAAATTGGCCGCATTTCGCTCCCGCATTCTGCGATGAATAAGGCTGCATCAGCTTTGCCGTCCATCGTGTTTTGTTTCGTCTTCACTTCTCGTTTTGTGCGGAGCTGGTACTCCATCAGGCGATTTGGTCTGATCTCGTTACCTCAAGTTTCAAATGGATCAGTATGAGAAAGTGGAGAAGATTGGAGAGGGCACATACGGTGTCGTATACAAGGCCCGGGATCGCCTCACTAATGAAACTATTGCTCTGAAAAAAATACGGCTGGAGCAAGAAGATGAAGGTGTTCCAAGCACCGCCATTCGAGAAATTTCACTCCTGAAAGAAATGCACCATGGCAACATCGTTCGGCTACAAGATGTGGTGCATAGTGAGAAACGATTGTACTTGGTTTTTGAATACCTGGACCTCGACCTAAAGAAGCATATGGACACCTGCCCGGACCTTGCCAAAGACCCACGCTTGATCAAGACCTTTCTATACCAGATCTTGCGGGGCATTGCTTATTGCCATGCCCACAGGGTCCTTCACAGAGACTTGAAACCTCAGAATCTTTTGATTGATCGACGTACCAATGCTTTGAAGCTAGCTGACTTTGGCCTTGCACGAGCTTTTGGTATTCCTGTCAGGACATTCACTCATGAGGTGGTAACATTGTGGTACAGAGCACCAGAAATTCTCTTAGGTTCTCGCCACTACTCTACACCTGTAGATGTGTGGTCTGTAGGATGCATTTTCGCTGAGATGGTCAATCAACGGCCCTTGTTTCCAGGAGATTCTGAGATAGATGAGCTGTTCAAAATCTTCAGGACACTTGGCACTCCAAATGAAGAAGTTTGGCCAGGTGTAACTTCATTGCCAGATTTCAAGACTGCTTTTCCAAAGTGGCCTCCGAAGCCTTTGTCATCAGTCGTACCTAGCCTTGAGCCAGCAGGCATCGACTTGCTAGAGGTATGTGATCTTTCAACTCCGGCATCTGAATTCTGTGTGGttttgtttttttttATTATTTCTACTTTTAGTCTAATTGTTCGCCTTAAGCAATGCATGCAGTCATATGCCTCTTGAAACCAGAATGATGGGAGCAGCGTATTCGGATATTGCAATTTGTTCCAATATCGGTTTCCAAGTCTTACGTTATTAGGACACCTGAAACAGAAAATGCTGACACTTGAGCCAAGTCGACGGGTAACAGCACGAAATGCATTGGAACACGAGTATTTCAAGGATATCGGTCTTGTACCCTGATTCTTGTATGCAACTTGTATGATACTGTCTAGGGTATCCCTGCAAGGCAGCTACTTTAGATTCTGAAGATCGGATTGCCTCCGTCGCCTTTCCTACTATgcaaaaaaaatgccattttttttcccaacaaaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ppa.441 | translated coding region predicted by ESTScan from UniGene Ppa.441 | XIRHERQPASYLTALSRVPPCDASSCLTKKPSRIVLSSFVPTNWPHFAPAFCDXIRLHQLCRPSCFVSSSLLVLCGAGTPSGDLVXSRYLKFQMDQYEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYFKDIGLVP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 67-74 | seg | VSSSLLVL |
| superfamily: SSF56112 IPR011009
|
83-452 | Protein kinase-like (PK-like) Protein kinase-like domain
|
DLVXSRYLKFQMDQYEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYFKDI |
| Gene3D: G3DSA:3.30.200.20 | 93-171 | no description | QMDQYEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYL |
| HMMPanther: PTHR24056:SF109 | 94-452 | SUBFAMILY NOT NAMED,SHAGGY-RELATED PROTEIN KINASE | MDQYEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYFKDI |
| HMMPanther: PTHR24056 | 94-452 | FAMILY NOT NAMED,CELL DIVISION PROTEIN KINASE | MDQYEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYFKDI |
| ProfileScan: PS50011 IPR000719
|
97-449 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYF |
| HMMPfam: PF00069 IPR017442
|
97-449 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
YEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYF |
| HMMSmart: SM00219 IPR020635
|
97-349 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSL |
| HMMSmart: SM00220 IPR002290
|
97-449 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YEKVEKIGEGTYGVVYKARDRLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDTCPDLAKDPRLIKTFLYQILRGIAYCHAHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRTLGTPNEEVWPGVTSLPDFKTAFPKWPPKPLSSVVPSLEPAGIDLLEVCDLSTPASEFCVVLFFFIISTFSLIVRLKQCMQSYASXNQNDGSSVFGYCNLFQYRFPSLTLLGHLKQKMLTLEPSRRVTARNALEHEYF |
| PatternScan: PS00107 IPR017441
|
103-126 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGEGTYGVVYKARDRLTNETIALK |
| PatternScan: PS00108 IPR008271
|
216-228 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VLHRDLKPQNLLI |
| Seg: seg | 335-351 | seg | PKWPPKPLSSVVPSLEP |
| Seg: seg | 371-385 | seg | VVLFFFIISTFSLIV |
| Gene3D: G3DSA:1.10.510.10 | 420-450 | no description | TLLGHLKQKMLTLEPSRRVTARNALEHEYFK |
List of Contributions
There has not been any contribution yet.
