PRGDB00074274 (Ppe.480)

Ppe.480
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	22489015 (BU048938)
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Prunus persica
	Comment?

PP_LEa0037L20f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0037L20f, mRNA sequence

DNA Sequence

CAGGGGCCTCAGTTTTCTTCATGAGGACCGAATCACAAGTCATATATCGGGACTTTAAGGCTTCCAATATCTTACTAGATTCAGAATTCAATGCGAAGCTTTCTGATTTTGGCTTAGCTAAGGCGGGCCCCACTGGTGACAGGACTCATGTATCTACTCAAGTCATGGGTACTCAAGGCTATGCAGCACCTGAATATGTTGCTACAGGTAGATTGACTGCTAAAAGTGATGTGTATAGTTTTGGTGTTGTATTACTGGAACTATTGTCTGGACGGCGAGCTGTCGATAAAACAAAAGTTGGTGTCGAGCAGAATCTTGTAGACTGGACAAAACCATATTTGGGTGACAGAAGAAAACTATTTCGGATTATGGACACCAAGTTGGAGGGCCAATATCCCCAGAAAGCAGCCTTTACAGCTGCTACTCTTGCTTCACAATGCCTATGCGCAGAATCTAAACTTAGGCCAACAATGTCAGTGGTATTAGCTACGCTGGAACAACTTGAAGCCCCAAAAACTGCAGCCAGAAACTCTCAATCAGAACAGCAGACGCTNTCTGTTCCTCACCGGAAGTCACCAATGCGACAACACCATTCTCCTCTCAATATACACCAAGTGCATCCCCATTGCTATCCCACCGGCAATCTCCACGTGTGCGTTGA

Protein sequences

Name	Description	Sequence
Ppe.480	translated coding region predicted by ESTScan from UniGene Ppe.480	XGASVFFMRTESQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQLEAPKTAARNSQSEQQTLSVPHRKSPMRQHHSPLNIHQVHPHCYPTGNLHVCVX

Domains

Domain	Start-End	Description	Sequence
ProfileScan: PS50011 IPR000719	1-168	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	XGASVFFMRTESQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQL
HMMSmart: SM00220 IPR002290	1-168	Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas	XGASVFFMRTESQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQL
Gene3D: G3DSA:1.10.510.10	11-190	no description	ESQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQLEAPKTAARNSQSEQQTLSVPHR
HMMPanther: PTHR24420:SF897	11-198	SUBFAMILY NOT NAMED	ESQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQLEAPKTAARNSQSEQQTLSVPHRKSPMRQHH
HMMPanther: PTHR24420	11-198	FAMILY NOT NAMED,FAMILY NOT NAMED	ESQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQLEAPKTAARNSQSEQQTLSVPHRKSPMRQHH
HMMPfam: PF00069 IPR017442	12-162	Pkinase,Ser-thr Serine/threonine-protein kinase-like domain	SQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVL
superfamily: SSF56112 IPR011009	13-173	Protein kinase-like (PK-like) Protein kinase-like domain	QVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVDWTKPYLGDRRKLFRIMDTKLEGQYPQKAAFTAATLASQCLCAESKLRPTMSVVLATLEQLEAPKT
PatternScan: PS00108 IPR008271	14-26	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	VIYRDFKASNILL

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Analyses

Blast

Blast matches against Reference R-Genes. Show