PRGDB00074280 (Ppe.903)
| Ppe.903 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 89488928 (DY644722) |
| Gene Class | Unknown |
| Domain Type | LRR |
| Gene Species | Prunus persica |
DNA Sequence
TGTATTTCTCCTGCCTTCTCCACAAACTCTGAAGGAAATGCTTTGCATGCTTTGAGAAGCAGACTCAATGATGCCACCAATGTCCTGCAGAGCTGGGACCCAACTCTGGTCAATCCCTGCACTTGGTTCCACGTTACCTGTGATTCTAATAACCATGTGATCCGTTTGGATTTGGGCAACTCTAACATTTCGGGGAGTTTGGGGCCTGAGCTTGGGGAGCTGAAGCACCTACAGTACTTGGAGCTTTATAGAAATGACATAAGTGGCAAAATCCCAAACGAGTTGGGGAAATTGAAAAGCCTTGTTAGCATGGATTTGTATGACAACAGATTTGAAGGAAAAATCCCCAAATCTTTCTCCAAATTGAAGTCACTCAGATTTCTGCGACTAAACAACAACAAACTAACAGGATCTATTCCAAGGGAGCTCGTCAGCCTTTCTAGCCTGAAAGTTTTTGATGTTTCCAACAATGATCTATGCGGAACAATTCCAGTTGATGGCCCATTCGGGACTTTCTCAATGGAAAGTTTTGAAACAACAGACTTAATGGCCCAGAGCTGAAGGACTGGTACCTACGACTTCGGTTGCTGAGAAGATGCTGGATTCGTCGATCTCTTTAAAGATATACTTGTATTATAAGACAGATTGACTACTATATATAGCTCTGCATGCAATGTATGATGATTGAGTACCTTCTACAAATAATTCGATCGACTCTAGACGCATGTTaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ppe.903 | translated coding region predicted by ESTScan from UniGene Ppe.903 | CISPAFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVDGPFGTFSMESFETTDLMAQS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF836 | 2-166 | SUBFAMILY NOT NAMED | ISPAFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVD |
| HMMPanther: PTHR24420 | 2-166 | FAMILY NOT NAMED,FAMILY NOT NAMED | ISPAFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVD |
| superfamily: SSF52058 | 5-164 | L domain-like,LRR | AFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIP |
| Gene3D: G3DSA:3.80.10.10 | 9-164 | no description | NSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIP |
| HMMPfam: PF08263 IPR013210
|
9-48 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
NSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCD |
| HMMPfam: PF00560 IPR001611
|
76-98 | LRR_1 Leucine-rich repeat
|
HLQYLELYRNDISGKIPNELGKL |
| HMMPfam: PF13855 | 100-159 | LRR_8,Leucine rich repeat | SLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDL |
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