PRGDB00074280 (Ppe.903)
Ppe.903 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 89488928 (DY644722) |
Gene Class | Unknown |
Domain Type | LRR |
Gene Species | Prunus persica |
DNA Sequence
TGTATTTCTCCTGCCTTCTCCACAAACTCTGAAGGAAATGCTTTGCATGCTTTGAGAAGCAGACTCAATGATGCCACCAATGTCCTGCAGAGCTGGGACCCAACTCTGGTCAATCCCTGCACTTGGTTCCACGTTACCTGTGATTCTAATAACCATGTGATCCGTTTGGATTTGGGCAACTCTAACATTTCGGGGAGTTTGGGGCCTGAGCTTGGGGAGCTGAAGCACCTACAGTACTTGGAGCTTTATAGAAATGACATAAGTGGCAAAATCCCAAACGAGTTGGGGAAATTGAAAAGCCTTGTTAGCATGGATTTGTATGACAACAGATTTGAAGGAAAAATCCCCAAATCTTTCTCCAAATTGAAGTCACTCAGATTTCTGCGACTAAACAACAACAAACTAACAGGATCTATTCCAAGGGAGCTCGTCAGCCTTTCTAGCCTGAAAGTTTTTGATGTTTCCAACAATGATCTATGCGGAACAATTCCAGTTGATGGCCCATTCGGGACTTTCTCAATGGAAAGTTTTGAAACAACAGACTTAATGGCCCAGAGCTGAAGGACTGGTACCTACGACTTCGGTTGCTGAGAAGATGCTGGATTCGTCGATCTCTTTAAAGATATACTTGTATTATAAGACAGATTGACTACTATATATAGCTCTGCATGCAATGTATGATGATTGAGTACCTTCTACAAATAATTCGATCGACTCTAGACGCATGTTaaaaaaaaa
Protein sequences
Name | Description | Sequence |
---|---|---|
Ppe.903 | translated coding region predicted by ESTScan from UniGene Ppe.903 | CISPAFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVDGPFGTFSMESFETTDLMAQS |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
HMMPanther: PTHR24420:SF836 | 2-166 | SUBFAMILY NOT NAMED | ISPAFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVD |
HMMPanther: PTHR24420 | 2-166 | FAMILY NOT NAMED,FAMILY NOT NAMED | ISPAFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIPVD |
superfamily: SSF52058 | 5-164 | L domain-like,LRR | AFSTNSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIP |
Gene3D: G3DSA:3.80.10.10 | 9-164 | no description | NSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELGELKHLQYLELYRNDISGKIPNELGKLKSLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDLCGTIP |
HMMPfam: PF08263 IPR013210
|
9-48 | LRRNT_2 Leucine-rich repeat-containing N-terminal, type 2
|
NSEGNALHALRSRLNDATNVLQSWDPTLVNPCTWFHVTCD |
HMMPfam: PF00560 IPR001611
|
76-98 | LRR_1 Leucine-rich repeat
|
HLQYLELYRNDISGKIPNELGKL |
HMMPfam: PF13855 | 100-159 | LRR_8,Leucine rich repeat | SLVSMDLYDNRFEGKIPKSFSKLKSLRFLRLNNNKLTGSIPRELVSLSSLKVFDVSNNDL |
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