PRGDB00075190 (Pth.5607)
| Pth.5607 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 224093265 (XM_002309822) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Populus trichocarpa |
DNA Sequence
ATGTATGATAACATTGAAGAATTCTTGCAAAGTCATGATCATAATCTCACGCTTATAAGGTACTCTTACTCGGAGATTAAGAAGATAACTCATGGATTCAATGATAAGTTAGGTGAAGGAGGTTATGGCTCGGTGTACAAAGGAAAGCTTCGTAGTGGCCGTTTTGCGGCTGTAAAAATTTTGCGCAAAGAAAAGGCTAATGGGCAAGATTTTATCAATGAAGTTGCCACCATTGGAAGAATTCACCATTGCAATGTGGTGTTGCTCATAGGCTTTACTGTTGAGGGCTCGAAGCGTGCTCTTATATATGAGTTCATGCCTAATGGATCTCTTGAAAAATATATTTTTTCTAGGCAAGGTAGCATACCGCTGAGCAACCAGAAAATATATGAAATTTCTCTTGGGGTGGCTCGTGGCATTGAATATCTACATGAAGGTTGTGACATGCAGATTTTGCATTTTGACATCAAGCCTCACAACATTCTTCTCGATGAAAATTTCACTCCAAAAGTCTCAGATTTTGGACTTGCAAAATTGTATCCAACTAATAATAGCATTGTGTCCCTTACTATGGCTAGAGGAACAATGGGATACATGGCTCCTGAGTTATTTTACAAAAGTATCGGAGGCGTCTCTTACAAAGCCGATGTCTATAGTTTTGGGATGTTATTGATGGAAATGGTTGGGAGAAGGAAAAATCTGAATGCATTAGCAGATCATTCAAGTCAGATGTACTTCCCTTCATGGATTTATGATCAGGTTAATAAAGGAAAGGATATACTTGAAGATCAAGCGACAGAGCATGAAAAGAACACAATAAAAAAGATGACTATAGTGGCATTATGGTGCATACAATTGAAGCCTATTGATCGTCCCTCGATGCATAGAGTTGTACAGATGCTTGAAGCGGATCTTGAATCTCTACAAATGCCTCCTAAGCCTTTTCTCGTTCCACAACAGACATCAAATGATGATAGGATCAATATGGCTAATCCAACAAGTTTAAGAGATTCATCGAATGTTTGTAGCATCGATTCTTCATATCAATTTGGTCGTTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Pth.5607 | translated coding region predicted by ESTScan from UniGene Pth.5607 | MYDNIEEFLQSHDHNLTLIRYSYSEIKKITHGFNDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEFMPNGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQMLEADLESLQMPPKPFLVPQQTSNDDRINMANPTSLRDSSNVCSIDSSYQFGR |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420:SF441 | 3-352 | PTHR24420:SF441,SUBFAMILY NOT NAMED | DNIEEFLQSHDHNLTLIRYSYSEIKKITHGFNDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEFMPNGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQMLEADLESLQMPPKPFLVPQQTSNDDRINMANPTSLRDSSNVCSIDSSYQFGR |
| superfamily: SSF56112 IPR011009
|
3-301 | Kinase_like Protein kinase-like domain
|
DNIEEFLQSHDHNLTLIRYSYSEIKKITHGFNDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEFMPNGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQML |
| HMMPanther: PTHR24420 | 3-352 | PTHR24420,FAMILY NOT NAMED | DNIEEFLQSHDHNLTLIRYSYSEIKKITHGFNDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEFMPNGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQMLEADLESLQMPPKPFLVPQQTSNDDRINMANPTSLRDSSNVCSIDSSYQFGR |
| Gene3D: G3DSA:3.30.200.20 | 19-105 | G3DSA:3.30.200.20 | IRYSYSEIKKITHGFNDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEF |
| ProfileScan: PS50011 IPR000719
|
31-316 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
HGFNDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEFMPNGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQMLEADLESLQMPPKPFL |
| HMMPfam: PF00069 IPR017442
|
34-299 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
NDKLGEGGYGSVYKGKLRSGRFAAVKILRKEKANGQDFINEVATIGRIHHCNVVLLIGFTVEGSKRALIYEFMPNGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQ |
| PatternScan: PS00107 IPR017441
|
37-59 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
LGEGGYGSVYKGKLRSGRFAAVK |
| Gene3D: G3DSA:1.10.510.10 | 108-326 | G3DSA:1.10.510.10 | NGSLEKYIFSRQGSIPLSNQKIYEISLGVARGIEYLHEGCDMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPTNNSIVSLTMARGTMGYMAPELFYKSIGGVSYKADVYSFGMLLMEMVGRRKNLNALADHSSQMYFPSWIYDQVNKGKDILEDQATEHEKNTIKKMTIVALWCIQLKPIDRPSMHRVVQMLEADLESLQMPPKPFLVPQQTSNDDR |
| PatternScan: PS00108 IPR008271
|
151-163 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
ILHFDIKPHNILL |
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