PRGDB00075611 (Pul.2237)
Pul.2237 | |
---|---|
Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
GenBank | 148605447 (EL782468) |
Gene Class | Unknown |
Domain Type | |
Gene Species | Pythium ultimum |
DNA Sequence
CACGTCGACACGTCCACTGGTGTGCTCGCGCACGTGAAGGACTTTGCGGCTGCGATCCGCAAGCAACAACCAGATGCCATTGTTGTTGTCGATGGTGTGTGCGCGTTGGGTGGCGAGGAGTGCCGCATGAAGCAGTGGGACTTGGATGTTGTTCTTACTGGTTCGCAGAAGTGCGTCGGTGTTCCAGCCGGTCTGAGTCTTATGGTGATTCGTCCTCGTGCTCTTCAAGCGTTTGAGAAGTGCACCTCGACCACCAAGTACTACGTCGACTGGCGCAACTGGTTGCCAATCATGAAGAACTATGAAGCGCGTCAACCAAGCTACTTTGCGACTCCTGCGGTCAACCACTTGTTTGCTCTCAACAAGGGTTTGGACATCTTGTTGGAGAATGGTGGCATCGAGCAACGTTTCGTGGAACACAAACTTGTCGGTGATGCGATTAAGGAAGCGATGAAGGCTTTGGGTTGCTCGTTTGTCACTGTGGAAGGCAGTGGTGCGCATACGTTGACTTGTGTTCGATACCCTGCTGGCGTTGGCGCTACCGATTTCTTGCCAAAGGTGGTGAAGCGTGGTGTGTCGCTTGCTGGTGGACTGCACAAGAAGATCAAGACTGAATACTTCCGCATTGGTCACATGGGACCTAGCACCCGTCGCTTGGATCACGTTTTGAAGACTGTGCAAGCGATTGAAGAGGCTTTCATCGAATGTGGCCACAACGTTCCTGAAAAGGGCAAGGCTGCCAAGATCATCAAGAAGCTGCAATCCCAGATCCCAATCAAGCCAGCTTGCTCGTACACGATGGCGTACCATGGATGCCCAGTCCCACCAAAGTGCCAAGTGTGGACATCGGAACGCTCGTGGCTGCGTTCGCCGCTGGTTTCTTGATCTCTACCTTG
Protein sequences
Name | Description | Sequence |
---|---|---|
Pul.2237 | translated coding region predicted by ESTScan from UniGene Pul.2237 | HVDTSTGVLAHVKDFAAAIRKQQPDAIVVVDGVCALGGEECRMKQWDLDVVLTGSQKCVGVPAGLSLMVIRPRALQAFEKCTSTTKYYVDWRNWLPIMKNYEARQPSYFATPAVNHLFALNKGLDILLENGGIEQRFVEHKLVGDAIKEAMKALGCSFVTVEGSGAHTLTCVRYPAGVGATDFLPKVVKRGVSLAGGLHKKIKTEYFRIGHMGPSTRRLDHVLKTVQAIEEAFIECGHNVPEKGKAAKIIKKLQSQIPIKPACSYTMAYHGCPSPTKVPSVDIGTLVAAFAAGFLISTL |
Domains
Domain | Start-End | Description | Sequence
|
---|---|---|---|
superfamily: SSF53383 IPR015424
|
1-237 | PLP-dependent transferases Pyridoxal phosphate-dependent transferase, major d
|
HVDTSTGVLAHVKDFAAAIRKQQPDAIVVVDGVCALGGEECRMKQWDLDVVLTGSQKCVGVPAGLSLMVIRPRALQAFEKCTSTTKYYVDWRNWLPIMKNYEARQPSYFATPAVNHLFALNKGLDILLENGGIEQRFVEHKLVGDAIKEAMKALGCSFVTVEGSGAHTLTCVRYPAGVGATDFLPKVVKRGVSLAGGLHKKIKTEYFRIGHMGPSTRRLDHVLKTVQAIEEAFIECG |
Gene3D: G3DSA:3.40.640.10 IPR015421
|
1-118 | no description Pyridoxal phosphate-dependent transferase, major r
|
HVDTSTGVLAHVKDFAAAIRKQQPDAIVVVDGVCALGGEECRMKQWDLDVVLTGSQKCVGVPAGLSLMVIRPRALQAFEKCTSTTKYYVDWRNWLPIMKNYEARQPSYFATPAVNHLF |
HMMPanther: PTHR21152:SF7 | 1-267 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | HVDTSTGVLAHVKDFAAAIRKQQPDAIVVVDGVCALGGEECRMKQWDLDVVLTGSQKCVGVPAGLSLMVIRPRALQAFEKCTSTTKYYVDWRNWLPIMKNYEARQPSYFATPAVNHLFALNKGLDILLENGGIEQRFVEHKLVGDAIKEAMKALGCSFVTVEGSGAHTLTCVRYPAGVGATDFLPKVVKRGVSLAGGLHKKIKTEYFRIGHMGPSTRRLDHVLKTVQAIEEAFIECGHNVPEKGKAAKIIKKLQSQIPIKPACSYTM |
HMMPanther: PTHR21152 | 1-267 | FAMILY NOT NAMED,AMINOTRANSFERASE CLASS V | HVDTSTGVLAHVKDFAAAIRKQQPDAIVVVDGVCALGGEECRMKQWDLDVVLTGSQKCVGVPAGLSLMVIRPRALQAFEKCTSTTKYYVDWRNWLPIMKNYEARQPSYFATPAVNHLFALNKGLDILLENGGIEQRFVEHKLVGDAIKEAMKALGCSFVTVEGSGAHTLTCVRYPAGVGATDFLPKVVKRGVSLAGGLHKKIKTEYFRIGHMGPSTRRLDHVLKTVQAIEEAFIECGHNVPEKGKAAKIIKKLQSQIPIKPACSYTM |
HMMPfam: PF00266 IPR000192
|
1-199 | Aminotran_5 Aminotransferase, class V/Cysteine desulfurase
|
HVDTSTGVLAHVKDFAAAIRKQQPDAIVVVDGVCALGGEECRMKQWDLDVVLTGSQKCVGVPAGLSLMVIRPRALQAFEKCTSTTKYYVDWRNWLPIMKNYEARQPSYFATPAVNHLFALNKGLDILLENGGIEQRFVEHKLVGDAIKEAMKALGCSFVTVEGSGAHTLTCVRYPAGVGATDFLPKVVKRGVSLAGGLH |
PatternScan: PS00595 IPR020578
|
48-68 | AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi
|
LDVVLTGSQKCVGVPAGLSLM |
Gene3D: G3DSA:3.90.1150.10 IPR015422
|
119-242 | no description Pyridoxal phosphate-dependent transferase, major r
|
ALNKGLDILLENGGIEQRFVEHKLVGDAIKEAMKALGCSFVTVEGSGAHTLTCVRYPAGVGATDFLPKVVKRGVSLAGGLHKKIKTEYFRIGHMGPSTRRLDHVLKTVQAIEEAFIECGHNVPE |
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