PRGDB00077609 (Ta.25393)
| Ta.25393 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 241983377 (AK331317) |
| Gene Class | N |
| Domain Type | NBS, Others |
| Gene Species | Triticum aestivum |
DNA Sequence
GAACTTATCCCCTCCCGAGCGGAGCCGCCATAgccgccacctcctccgcccctctcctgtggctgcctccggcgccgtgcgcctcaccctcctccCCATCTTCTCCATCGCTACCAACCACCGCCCTCcgccacccaagtcgagccgccgccgcccaagtcgagccgccgccgccggatcagcttgccgccCACCTTCTCCCCATATGCTCCGTCCAGCCTGCCGCTTCTCTTAACCGCTGCCGGATCGAGCTCGCCTCGCAGCTGAACGGGGAGGTACCTCACGATTTCGTTGTCGTCTGATCTTAACTAATTTTGCTCTCTGATCTTAAATTGCAACAAGTCTGTGAGGATAACTACGAGGTATCTGTGATGGATGTGGGGTGGAGGAAGAGGGCGGAGGCGGTGATGGATTTGGGGAGTAGGAAGAATTGGGGGGTGTATACGGGCATATTCATTGTGCTCATGCTCGTCATACCCGCTATCCCGCATGATGAGGACTATCATGACTTTGCCGACCAACGCACACTTTTCCTTGGGATCCCTAATACGCTGAATGTGATCTCAATAATTCCCTTCATTTTTGTTGGTCTTGCCGGGCTTATCCTTAACCACTGCGAAAGCTCACAGAGGGGTCTCTACACAATCTTCTTTGCTGGTGTCAGTGTTGTTGGTTTTGGTTCATTCTTTTACCATCTCAACCCGAAAAATGACTCACTATTTTGGGACACATTGCCAATGATGGTCACTTTCACATCTTTCGAGGCCATTTTCATTATCGAAAGGTTTGATGATTTGGCAGGAACAAAGTCGTTTGCATCAACGAGCTACTGGCTATGTGCAGCAGGATTTTACGTTCTTGCAAGAGTACAAGAGGTTGCAGACAAACCAATTTATACGTGGACACTTCATATTGTCAGTGGGCATACTCTTGGTCATTTATGTGCTGCAATGGTGCCTCTTTTTTATATTCTCTTGTTAGAGAAAAGGACAAGGCCAATTCAACCAGAAAGGCACATGATTCTAGTGCATCATCAATTAAAGCTTGCTTTCATGGTCTGCTTATTGGTGCCCAAGATGATCTGCCTATGGATGCCCAAGTTACAGGTTAGTGCCATAATGTATGAAATCAGCATTTTGATGTGGGAGTTCAGTGCTCGTTATGTGGCTAATCAGGCAAAGACCTCTGAAGAGCGAGGAATGTTAGAAACCCCAATTCGTGCTCGGCAAATAGTGCCTCGTGTTCGCGGCCTTTATGGGATGGACATTTATAAGAATAAGGTCTTAGAATTCTTACAAAGTGAACGATCTGATGAGTCTATATTTGGATTATGGGGCACGTCGGGTGTTGGCAAGACACGGCTTCTTTCACTCATCGCTGATAGCTTTGCCGATTCATTTCATCACGTCATATTTCTTGATGGTGGTAGTAGCGTCAGAGTTATGCAAAATCATTTCGCATACTTTTTGAAATTGGATTGGGAGACAATCTCATTGTTGGAGGAGCATTACCGAGCTAAAATCATCATGGAGTACCTAGAGCATGTCAGTTTTTTGGTTCTGTTAGACGATGTGCAAGATGAAGTCTACCCAGATTTGACAGCTGTTGGTTTGCCGATGGCTCTTGGGCATAGGCAAAAGGTTATTCTTACGTCGAGGAGTCAGGTAGCATGTGCTCGCATGGGATGCACCATATCAAACACTCTGGAGATGAAGTGTCTCGGGGATGAAGATGCTTGGAGTCTTTTCGAGTATAATGCGGGAGTAAAAATCACAGAAGCTGATACTGAAATTTATGAATATGCAAAAAAGATGGTTTCAGCATGTGGAGGGTTGCCTAGAGCCATATGTGCTATTGGCATAGGCGTAGCCGGTGCCACTTGCAGGGGAAAACATCCAGATGATTGGTGGTTTACCTACAAGCGTTTCAAGGCTAAAAATCTGCCACCGGAACGAATGGAAGAAATAGTGCCTGTTCTGGTTTAGGCAACTTGTGCGTGGCTCCTAGGAGCTGTGGAGACATGGTTGGACTTCATTACGTGTTGCTGCCACAATGAAGTGTTGGAAGAGTCCAGATGGCGGCAGTTTGATGCTTACTTGTGAATATGGTGTGATATGTTTGATGATATTACTTTTTCTAGTATGTGTTTTCTTGACTTGTCAGTCTTCTGATGCGTAAACACAGAGAGCAGAACACCTTCATGCTCCTTAAGCACTCCGGGCAGTTGGCCTTTTAAAAATTGTATTATATaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaaaaaaCGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ta.25393 | translated coding region predicted by ESTScan from UniGene Ta.25393 | XTYPLPSGAAIAATSSAPLLWLPPAPCASPSSPSSPSLPTTALRHPSRAAAAQVEPPPPDQLAAHLLPICSVQPAASLNRCRIELASQLNGEVPHDFVVVXSXLILLSDLKLQQVCEDNYEVSVMDVGWRKRAEAVMDLGSRKNWGVYTGIFIVLMLVIPAIPHDEDYHDFADQRTLFLGIPNTLNVISIIPFIFVGLAGLILNHCESSQRGLYTIFFAGVSVVGFGSFFYHLNPKNDSLFWDTLPMMVTFTSFEAIFIIERFDDLAGTKSFASTSYWLCAAGFYVLARVQEVADKPIYTWTLHIVSGHTLGHLCAAMVPLFYILLLEKRTRPIQPERHMILVHHQLKLAFMVCLLVPKMICLWMPKLQVSAIMYEISILMWEFSARYVANQAKTSEERGMLETPIRARQIVPRVRGLYGMDIYKNKVLEFLQSERSDESIFGLWGTSGVGKTRLLSLIADSFADSFHHVIFLDGGSSVRVMQNHFAYFLKLDWETISLLEEHYRAKIIMEYLEHVSFLVLLDDVQDEVYPDLTAVGLPMALGHRQKVILTSRSQVACARMGCTISNTLEMKCLGDEDAWSLFEYNAGVKITEADTEIYEYAKKMVSACGGLPRAICAIGIGVAGATCRGKHPDDWWFTYKRFKAKNLPPERMEEIVPVLVXATCAWLLGAVETWLDFITCCCHNEVLEESRWRQFDAYL |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 12-43 | seg | AATSSAPLLWLPPAPCASPSSPSSPSLPTTAL |
| Seg: seg | 98-115 | seg | VVVXSXLILLSDLKLQQV |
| superfamily: SSF52540 | 401-630 | P-loop containing nucleoside triphosphate hydrolases | MLETPIRARQIVPRVRGLYGMDIYKNKVLEFLQSERSDESIFGLWGTSGVGKTRLLSLIADSFADSFHHVIFLDGGSSVRVMQNHFAYFLKLDWETISLLEEHYRAKIIMEYLEHVSFLVLLDDVQDEVYPDLTAVGLPMALGHRQKVILTSRSQVACARMGCTISNTLEMKCLGDEDAWSLFEYNAGVKITEADTEIYEYAKKMVSACGGLPRAICAIGIGVAGATCRG |
| HMMPfam: PF00931 IPR002182
|
425-647 | NB-ARC,NBS NB-ARC
|
KNKVLEFLQSERSDESIFGLWGTSGVGKTRLLSLIADSFADSFHHVIFLDGGSSVRVMQNHFAYFLKLDWETISLLEEHYRAKIIMEYLEHVSFLVLLDDVQDEVYPDLTAVGLPMALGHRQKVILTSRSQVACARMGCTISNTLEMKCLGDEDAWSLFEYNAGVKITEADTEIYEYAKKMVSACGGLPRAICAIGIGVAGATCRGKHPDDWWFTYKRFKAKN |
| Gene3D: G3DSA:3.40.50.300 | 434-528 | no description | SERSDESIFGLWGTSGVGKTRLLSLIADSFADSFHHVIFLDGGSSVRVMQNHFAYFLKLDWETISLLEEHYRAKIIMEYLEHVSFLVLLDDVQDE |
| FPrintScan: PR00364 IPR000767
|
441-456 | DISEASERSIST Disease resistance protein
|
IFGLWGTSGVGKTRLL |
| FPrintScan: PR00364 IPR000767
|
512-526 | DISEASERSIST Disease resistance protein
|
YLEHVSFLVLLDDVQ |
| FPrintScan: PR00364 IPR000767
|
609-623 | DISEASERSIST Disease resistance protein
|
CGGLPRAICAIGIGV |
| Seg: seg | 615-626 | seg | AICAIGIGVAGA |
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