PRGDB00077649 (Ta.27859)
| Ta.27859 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 63175647 (DQ013358) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Triticum aestivum |
DNA Sequence
TAGCAAGTGAGCAGAAGATACACCACGATGGCTCCACCGGCGAAACTGACCCAGTATACCCAGCTGATCCTACTCCTCCTTGCAGCAGCAGTAGCTAGTGATCACTTGACCCTGCAGCAGGCTGCGGCTGCCGCCGATGAATTACAAGGCCGACCGCAGCAGGGGCTGGGGCGTCCGGGTTGCCGGGACAAGTGCGGCGACATGAGCATCCCGTTCCCCTTCGGCATGGACAAGCCCGGCTGCTTCCTACCCGGCTTCGAGGTCACCTGCAACACCTCCTCCACTCCGCCTCGCGCCTTCCTCGCCTACAACCACAGCGAGCCACCATACCAGGTGATTTACCAGTATGCATTCGACACTGAGAGTGGGGCTACAAGCCAAATAGAGGGGCGTCAGGCGGTCGAGCTGTTCGACATATCACTCGAGACGAGCGAGGTACGTGTGTACAGCGGCGTCAATTCCCGGTGCTTCACAAACGATTCCGCGGGTTTAGACAAGGGTGAATACATGGAGTTGGACAGGGAGGGGCCGTTCCTCCTGTCGTCGACGCGCGACGATCTCGTCGGCGTCGGCTGGAACGCCGAGCCCTCCATGACATACACGGTCAAGGCCTCGCCGGGCCCTCTCTCCTGCACTTCAAACCTTCCCTTCATGTTTGCGGCCAAAGATGGGGTGTGCTCGGGTCTGGGCTGCTGTCAGATTGCCCTGCCGCCGCAGATACCGACTCTCCCTGTCATCAGTACCGGGTTGATCTTGAAGAATTACATCAATATTCGCTGGGAAACCAATCCATGCTCCTACGGCATGGTGGTGGAGAGGTCATGGTACAACTTCACGGAGGAGGACTTGTACGGCTACGAGGTGTTATCTACGAAACTCAGCAGGGGCTTCCCGTTGGTGCTTGATTTCGCCATCAGGGACGGCTCGTGTGAGCGCGACGGCTGCCTCAGCGGCAACAGTTCTTGTGCCAAAGCAGCCGGAGGCTATGTCTGCAAGTGCCGGGAGCATTACAATGGCAACCCCTACATCACCGATGGATGCCAAGACATCGATGAATGTCAGCTCCGAGAACAGAGTCCCGAGTTCCGAGATTTATATCCGTGTGACGGGATCTGCACCAACATACCCGGAGGATATGACTGCCGATGCAAACGCGGGATGAAAGGCGACGCCAAAAAGGGAAACTGCGCCGAAATTTTTCCCCTGTCAGCAAAGATCATCGTTGGTCTTGCTGGATGGATTGTTGTCTTTGTCATCATTATTATGGCCAAGCAACACCTAAAACTTAAGAAGTTCTATGCACAAAATGGTGGTCCAATACTTAATGGTGTCAAGAATATACGGGTATACACGAGGAAACAGCTGAAACAAGTAACAAGCAACTATGAGTGTGTCATTGGACAGGGCCACTTTGGTAAGGTTTATAAGGGCACTCTGAAAGATAAACAACAAGTGGCTGTGAAGAAGTCCATCAAAGTTGACAAGGACATGAAGAAGGAATTCACCGATGAGGTTATAATCCAATCCGAGATGAGGCACAAAAACATTGTCAGGCTCCTAGGTTGTTGCCTAGAGTTCGATGTTCCCATGTTGGTGTAAGAGTTTGTGGCGAAAGGGAGTTTGTATGATGCCCTCTTCAAAAGGAAGGATAGCATTCCAGTGAACAAGCGCCTTGCAATTGCTATTGGGTCAGCTGAAGGCCTAACATATATGCACTCGGCTGGGGAGAGTACGATACGTCACGGTGATGTTAAATCTGCAAACATTCTTCTTGATGAACATTTCACCCCAAAAGTTTCAGACTTTGGTACCTCGAAGTTGTTCGCAAAAGGAAAAGACGAGGAGACTGATCGTGTTATTGGGGACATGAGTTACATAGATCCAATATATATGGAGAAGGGGGTCATTACACAAAAGAGTGATGTCTACAGTTTTGGAATTGTTCTCATAGAGCTCATCACAAGAAGACCTGCAACATATGACGTCAAGAGGAGCTATGTTGCAAACTTTGTTCAATCTTGTGCAGAAAAAAGAGTAAGGAACTTTATTGATAACGATATTACAAGTGAGGTTGATATTGCTATGTTGGAAATGGTTAGTGGGGTTGCTGCAGATTGTCTAAAACCTAATCCAGAAGAATGGCATGATATGAAACAAGTAGAACACCGGCTCCTCAAAATTATTGGACAACCCGTATATCATGGTCAGAAGGGAAACTCCCAGTTAGATCTTCGTCCTGCACCTGATCATGTTGCTTTGCTTAGCTAACATGTTGCATTTTCATTTGGTTATGTAATGTGGTTTCTTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ta.27859 | translated coding region predicted by ESTScan from UniGene Ta.27859 | MAPPAKLTQYTQLILLLLAAAVASDHLTLQQAAAAADELQGRPQQGLGRPGCRDKCGDMSIPFPFGMDKPGCFLPGFEVTCNTSSTPPRAFLAYNHSEPPYQVIYQYAFDTESGATSQIEGRQAVELFDISLETSEVRVYSGVNSRCFTNDSAGLDKGEYMELDREGPFLLSSTRDDLVGVGWNAEPSMTYTVKASPGPLSCTSNLPFMFAAKDGVCSGLGCCQIALPPQIPTLPVISTGLILKNYINIRWETNPCSYGMVVERSWYNFTEEDLYGYEVLSTKLSRGFPLVLDFAIRDGSCERDGCLSGNSSCAKAAGGYVCKCREHYNGNPYITDGCQDIDECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNCAEIFPLSAKIIVGLAGWIVVFVIIIMAKQHLKLKKFYAQNGGPILNGVKNIRVYTRKQLKQVTSNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRLLKIIGQPVYHGQKGNSQLDLRPAPDHVALLS |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 13-23 | seg | LILLLLAAAVA |
| Seg: seg | 30-36 | seg | QQAAAAA |
| Seg: seg | 39-51 | seg | LQGRPQQGLGRPG |
| HMMPfam: PF13947 IPR025287
|
50-184 | GUB_WAK_bind Wall-associated receptor kinase galacturonan-bindi
|
PGCRDKCGDMSIPFPFGMDKPGCFLPGFEVTCNTSSTPPRAFLAYNHSEPPYQVIYQYAFDTESGATSQIEGRQAVELFDISLETSEVRVYSGVNSRCFTNDSAGLDKGEYMELDREGPFLLSSTRDDLVGVGWN |
| superfamily: SSF57196 | 299-356 | EGF/Laminin | GSCERDGCLSGNSSCAKAAGGYVCKCREHYNGNPYITDGCQDIDECQLREQSPEFRDL |
| HMMSmart: SM00181 IPR006210
|
300-339 | Epidermal growth factor-like domain. Epidermal growth factor-like
|
SCERDGCLSGNSSCAKAAGGYVCKCREHYNGNPYITDGCQ |
| Gene3D: G3DSA:2.10.25.10 | 301-387 | no description | CERDGCLSGNSSCAKAAGGYVCKCREHYNGNPYITDGCQDIDECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNC |
| HMMPanther: PTHR24420:SF444 | 306-718 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | CLSGNSSCAKAAGGYVCKCREHYNGNPYITDGCQDIDECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNCAEIFPLSAKIIVGLAGWIVVFVIIIMAKQHLKLKKFYAQNGGPILNGVKNIRVYTRKQLKQVTSNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRLLKI |
| HMMPanther: PTHR24420 | 306-718 | FAMILY NOT NAMED,FAMILY NOT NAMED | CLSGNSSCAKAAGGYVCKCREHYNGNPYITDGCQDIDECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNCAEIFPLSAKIIVGLAGWIVVFVIIIMAKQHLKLKKFYAQNGGPILNGVKNIRVYTRKQLKQVTSNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRLLKI |
| superfamily: SSF57196 | 338-390 | EGF/Laminin | CQDIDECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNCAEI |
| PatternScan: PS01187 IPR018097
|
340-372 | EGF_CA EGF-like calcium-binding, conserved site
|
DIDECQLREQSPEFRDLYPCDGICTNIPGGYDC |
| HMMSmart: SM00179 IPR001881
|
340-388 | Calcium-binding EGF-like domain EGF-like calcium-binding
|
DIDECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNCA |
| HMMSmart: SM00181 IPR006210
|
343-388 | Epidermal growth factor-like domain. Epidermal growth factor-like
|
ECQLREQSPEFRDLYPCDGICTNIPGGYDCRCKRGMKGDAKKGNCA |
| superfamily: SSF56112 IPR011009
|
425-715 | Protein kinase-like (PK-like) Protein kinase-like domain
|
AQNGGPILNGVKNIRVYTRKQLKQVTSNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRL |
| Gene3D: G3DSA:3.30.200.20 | 437-513 | no description | NIRVYTRKQLKQVTSNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGC |
| ProfileScan: PS50011 IPR000719
|
451-716 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
SNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRLL |
| HMMSmart: SM00219 IPR020635
|
451-715 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
SNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRL |
| HMMSmart: SM00220 IPR002290
|
451-716 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
SNYECVIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEHRLL |
| HMMPfam: PF00069 IPR017442
|
456-712 | Pkinase,Ser-thr Serine/threonine-protein kinase-like domain
|
VIGQGHFGKVYKGTLKDKQQVAVKKSIKVDKDMKKEFTDEVIIQSEMRHKNIVRLLGCCLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVE |
| PatternScan: PS00107 IPR017441
|
457-480 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGQGHFGKVYKGTLKDKQQVAVKK |
| Seg: seg | 478-490 | seg | VKKSIKVDKDMKK |
| Gene3D: G3DSA:1.10.510.10 | 514-713 | no description | CLEFDVPMLVXEFVAKGSLYDALFKRKDSIPVNKRLAIAIGSAEGLTYMHSAGESTIRHGDVKSANILLDEHFTPKVSDFGTSKLFAKGKDEETDRVIGDMSYIDPIYMEKGVITQKSDVYSFGIVLIELITRRPATYDVKRSYVANFVQSCAEKRVRNFIDNDITSEVDIAMLEMVSGVAADCLKPNPEEWHDMKQVEH |
| PatternScan: PS00108 IPR008271
|
570-582 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IRHGDVKSANILL |
List of Contributions
There has not been any contribution yet.
