PRGDB00077880 (Ta.48419)

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Ta.48419
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 32128804 (BT009253)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Triticum aestivum

Comment?

Triticum aestivum clone wlk4.pk0007.c4:fis, full insert mRNA sequence

DNA Sequence

GATGCAAGTGTGAGCCCACCGTGTCCGCCCCATTCACGCCCTAGCCACATGGAGCATTCGGCGCCGGCGCCGGAGCCGATGCTGCTCGACGAGCAGCCCCCCACCGCAGTCGCCTGCGAGAAGAAGCAGCAGGATGGCGAGGCGCCGTATGCGGAGGGGAACGACGCCATGACCGGTCACATCATCTCCACCACCATCGGCGGCAAGAACGGCGAGCCCAAGCAGACGATTAGCTACATGGCGGAGCGCGTTGTGGGCACTGGTTCGTTTGGCATCGTCTTTCAGGCTAAATGCCTGGAAACCGGGGAGACGGTGGCCATTAAGAAGGTACTGCAGGACAGACGGTACAAGAACCGTGAGCTGCAGCTTATGCGTTCGATGATCCATTCCAATGTTGTCTCCCTCAAGCACTGCTTCTTCTCAACCACAAGTAGAGATGAGCTGTTTCTGAACCTTGTCATGGAGTATGTCCCGGAGACGCTCTACCGCGTGCTTAAGCACTACAGTAATGCCAAACAGGGGATGCCACTTATCTACGTCAAGCTTTACACCTATCAGCTATTCAGGGGGCTGGCGTACATTCATACTGTTCCAGGAGTCTGTCACAGGGATGTGAAGCCACAAAATGTTTTGGTTGATCCTTTAACACATCAAGTTAAGATCTGCGACTTTGGAAGCGCGAAAGTTCTGGTGGCGGGTGAGCCCAATATATCATACATATGCTCACGCTACTACCGTGCTCCGGAGCTTATATTTGGTGCGACTGAATATACAATATCGATAGATATATGGTCAGCTGGTTGTGTTCTTGCAGAACTGCTCCTTGGTCAGCCATTATTTCCAGGAGAGAGTGCAGTCGATCAACTCGTAGAGATAATCAAGGTTCTTGGAACGCCAACTCGGGAGGAAATACGTTGTATGAACCCGAATTATACGGAGTTTAGGTTTCCGCAGATAAAAGCTCATCCTTGGCACAAGGTTTTCCACAAGAAAATGCCTCCTGAAGCCATAGATCTTGCTTCACGTCTTCTTCAATATTCACCAAGCCTCCGTTGCACTGCTCTTGACGCATGTGCGCATCCTTTCTTTGATGAGCTACGGGAGCCTAATGCGCGCCTGCCAAACGGACGCCCGTTCCCACCTCTGTTCAACTTCAAGCATGAACTGGCCAATGCTTCACAAGACCTCATCAACAGGCTTGTGCCTGAACATGTTCGCCGACAAGCTGGTCTTGCTTTCGTGCATGCGGGGAGCTAAATATGCGCACCGGTGCCCTCAACCTTGCACCTTATTGTTTTGCCATGGGCAGAAGGGTGGTGGTTTAAGATGGAGGCAGGTCAGATGATCCCTGGAGCGATATATGCCAGATTCCATCATCAGGAGTACCGGTAGAGCAGCGAGGAATAACAACTGTCTAGATCATCTGCCAGGGAAGGAGCCTTGCCAGGGAAACAGCATAGCCTTACGCCGTGGACCCGAGTTTTCTTTCAGTTTTTGCCCTATTGTAAGAGTTCATAGCTTCTTAATGTACTGTGGCTCGTAAGTTGTCAACTATTTCGTTCACCATTCACTGACGGAAATTGTTGCTGTAAACTTCGCTGTTCAATAAGTTGTGTCATGGTAGAGCTTGCACGCCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaa


Protein sequences

Name Description Sequence
Ta.48419 translated coding region predicted by ESTScan from UniGene Ta.48419

DASVSPPCPPHSRPSHMEHSAPAPEPMLLDEQPPTAVACEKKQQDGEAPYAEGNDAMTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFFDELREPNARLPNGRPFPPLFNFKHELANASQDLINRLVPEHVRRQAGLAFVHAGS

Domains

Domain Start-End Description Sequence

Seg: seg
3-15 seg

SVSPPCPPHSRPS

HMMPanther: PTHR24057
57-410 FAMILY NOT NAMED,GLYCOGEN SYNTHASE KINASE-3 ALPHA

MTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFFDELREPNARLPNGRPFPPLFNFKHELANASQDLINRLVPEHVRRQAG

Gene3D: G3DSA:3.30.200.20
74-154 no description

KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVM

superfamily: SSF56112
IPR011009
78-394 Protein kinase-like (PK-like)
Protein kinase-like domain

SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFFDELREPNARLPNGRPFPPLFNFKHELANASQ

ProfileScan: PS50011
IPR000719
79-363 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFF

HMMSmart: SM00220
IPR002290
79-363 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFF

HMMSmart: SM00219
IPR020635
79-363 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFF

HMMPfam: PF00069
IPR017442
82-363 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRSMIHSNVVSLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFF

PatternScan: PS00107
IPR017441
85-109 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

VGTGSFGIVFQAKCLETGETVAIKK

Gene3D: G3DSA:1.10.510.10
155-370 no description

EYVPETLYRVLKHYSNAKQGMPLIYVKLYTYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKICDFGSAKVLVAGEPNISYICSRYYRAPELIFGATEYTISIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKKMPPEAIDLASRLLQYSPSLRCTALDACAHPFFDELREPN

PatternScan: PS00108
IPR008271
200-212 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VCHRDVKPQNVLV






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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