PRGDB00077941 (Ta.52115)

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Ta.52115
Gene Type Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank 70959206 (DR732549)
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Triticum aestivum

Comment?

FGAS078469 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA, mRNA sequence

DNA Sequence

gcacagaacggtggagtgattangccccgctatcattgtgatactatagaatactcaagctatgcatccaacgcgttgggagctctcccatatggtcgacctgcaggcggcccgactagtgattagcgtggtcgcggccgaggtTATCATTGTAGAATCTGCACAAGGTCTAGCTTATCTGCATTCACAAACTCATATCAAAATCCTGCACGGTGGTGTCAAACTGGCAAATATACTCTTGGATGATAACTTTATACCAAAGATCTCAGACTTTGGCATATCTAAGTTGGGGACGGGAGATGAGGAACACACTGGACGCGTCATCGGTGACATGAGTTATATGGATCCAGTATACATGCAAACAGGCCTGCTGACCTTGAAAAGTGATGTGTACAGTTTTGGAATTGTGATCTTGGAGCTCATTAGCAGGAAAAAGGCCATTAATTCTGATAATCACAGACTAGTGAGGGACTTCCTTGAAGTTCACAAACAAGGGAAGAAAGCAACCGAGCTGTTTGACAAGGAAATTGCAGTAACAGCAGCAGATTTGGAGATTCTTGACTGTCTAGCTGAGGTTGCTATGGAATGTATTGATCTTGATGTGGATAAAAGGCCCACCACGAGAGATGTTGCAGAGCGCCTTCTCATACTGAATCGATCTTGTAGGTCAAAAGTTATTTGCCAATAAGCTTACTTGTATTGTTGTGTGAACCACATGCATGTCGTCGAATAACATAGGCAACTCTCAGTGTGTGATTTATTTTGCTGTGGTGAAGATCCTTGAAGACACTATAGAACACGCATATATCATGCAATCTACTCCTCCCTTTGGTCAACGNGGTGCTCCGAGGCCCGCCCCCGCTCCGCGCCGCCGGGCCCG


Protein sequences

Name Description Sequence
Ta.52115 translated coding region predicted by ESTScan from UniGene Ta.52115

AQNGGVIXPRYHCDTIEYSSYASNALGALPYGRPAGGPTSDYVVAAEVIIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLILNRSCRSKVICQ

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
1-216 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

AQNGGVIXPRYHCDTIEYSSYASNALGALPYGRPAGGPTSDYVVAAEVIIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLI

HMMSmart: SM00219
IPR020635
1-214 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

AQNGGVIXPRYHCDTIEYSSYASNALGALPYGRPAGGPTSDYVVAAEVIIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERL

HMMSmart: SM00220
IPR002290
11-216 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

YHCDTIEYSSYASNALGALPYGRPAGGPTSDYVVAAEVIIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLI

Seg: seg
43-52 seg

VVAAEVIIVE

HMMPfam: PF00069
IPR017442
48-212 Pkinase,Ser-thr
Serine/threonine-protein kinase-like domain

VIIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAE

superfamily: SSF56112
IPR011009
49-218 Protein kinase-like (PK-like)
Protein kinase-like domain

IIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLILN

Gene3D: G3DSA:1.10.510.10
49-217 no description

IIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLIL

HMMPanther: PTHR24420:SF444
49-220 SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED

IIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLILNRS

HMMPanther: PTHR24420
49-220 FAMILY NOT NAMED,FAMILY NOT NAMED

IIVESAQGLAYLHSQTHIKILHGGVKLANILLDDNFIPKISDFGISKLGTGDEEHTGRVIGDMSYMDPVYMQTGLLTLKSDVYSFGIVILELISRKKAINSDNHRLVRDFLEVHKQGKKATELFDKEIAVTAADLEILDCLAEVAMECIDLDVDKRPTTRDVAERLLILNRS






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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