PRGDB00079733 (Fne.6967)

Fne.6967
Gene Type	Putative_R-Genes,_predicted_from_NCBI_UniGene
GenBank	58261347 (XM_568084)
Gene Class	Unknown
Domain Type
Gene Species	Neslia paniculata
	Comment?

Cryptococcus neoformans var. neoformans JEC21 chromosome 12

DNA Sequence

CTCGAGTGCAGTTTGTATTTGTCAACTACATACATATCCATTTAAAGACACCCCATACTATCTTAGCGTAAGCAGTTCAGTACGGTACCAACTCAAAAGCCCCAGAAAAGTAGTCATGTCCGACTTCCATCAAGCTCCCCACAAGCTTTTGGTCATTCCTGGCCCTATCGAGTTCTCTGACCCCGTCCTCGCTGCCAACGCGACTCCCGGTACTGCGCACACATCTCCTGCCTTTATTCCTGTCTTCGGCGAAGCGCTATCTCTCCTTCGTGACGTTCTTTTATCCGCTAAGGAGAGCGGATCCCAACCTCTTCTGATTGCGGGTAGCGGTACTTTGGGCTGGGATGCAGTCGCTGCCAACCTCATTGAGAAAGGTGAAGAGGCTGTTGTCCTCAACACTGGCTACTTTAGTGACTCTTTCGGCGAGTGCCTCGAAGCTTACGGTGCCAAGGTTACTCATGTGAAGGCCGAGGTCGGTGGCATTCCTACTGATGATGCCATTATCTCAGCCCTGGCTTCTAAGCCTAAGCTTCTTACCATCACCCATGTCGACACTTCCACCGGTGTCCTTTCACCAGCTGATCACATAGCTTCTCTTGTTAAGAAGCACTCTCCTGACACCCTCATTGCTCTTGACGCCGTGTGCTCAGTGGCTTCCGAAGAAATCAAGTTTGACGAATGGGGACTGGATGTCGTCCTCAGCGCTACTCAGAAGGGCCTTGGTGTACCTCCTGGTTTGAGCGTTGTGCTTGCCAGCAAGAGGGCTGTGGAGACCGTTGAGAAAAGGAAGACTCCTATCCCCGCTTACTATGTCTCTTGGAAGAAGTGGATCCCCATTATGCAGAACTACGAAAGCGGAAAGCCATCTTACTTTGCTACTCCCCCCGTCCAGCTCGTCTATGCGCTTCACACCTCTCTCAAATCCATTACTTCTGCACCTCTGGCAGACCGTTTCAAGGCTCACAAGGCTGCCAGCGCCTATGTTAAGGACAGCCTCGCCGAACTTGGTCTTGAATTCGTCCCCAAGAGCCGTGACATTGCTGCGAACGGTATGACCGCTGTCAGGTTCCCTAAAGGTGTGAAGGCGCCCGATGTCCTTCCTAAATTGGCCGAGCGAGACATCGTTGTGGCCGCTGGCTTGCATAAGGCCATTGTTAGCGAATACTTTCGAATCGGACACATGGGTATCACCGCTGTCGACAGGCAAAGGGGCGATCTGGAAAAGGTTGTCAAGGGTATCAAGGAGGTTTTGGGCAAGGCTTGAATCTCTAGCACAAATATTGAAGGTTATAGAGCCAAGCTGTAAATGCGATAAAAACGCATCGAAGTGGAAGAAGATCATATGGCTACTCTTTTGGGAGATAGCAATTTGTATGAATAGCCCCTGAAGGCTTATTTTAAATCT

Protein sequences

Name	Description	Sequence
Fne.6967	translated coding region predicted by ESTScan from UniGene Fne.6967	XSSAVCICQLHTYPFKDTPYYLSVSSSVRYQLKSPRKVVMSDFHQAPHKLLVIPGPIEFSDPVLAANATPGTAHTSPAFIPVFGEALSLLRDVLLSAKESGSQPLLIAGSGTLGWDAVAANLIEKGEEAVVLNTGYFSDSFGECLEAYGAKVTHVKAEVGGIPTDDAIISALASKPKLLTITHVDTSTGVLSPADHIASLVKKHSPDTLIALDAVCSVASEEIKFDEWGLDVVLSATQKGLGVPPGLSVVLASKRAVETVEKRKTPIPAYYVSWKKWIPIMQNYESGKPSYFATPPVQLVYALHTSLKSITSAPLADRFKAHKAASAYVKDSLAELGLEFVPKSRDIAANGMTAVRFPKGVKAPDVLPKLAERDIVVAAGLHKAIVSEYFRIGHMGITAVDRQRGDLEKVVKGIKEVLGKA

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR21152:SF7	39-418	SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED	VMSDFHQAPHKLLVIPGPIEFSDPVLAANATPGTAHTSPAFIPVFGEALSLLRDVLLSAKESGSQPLLIAGSGTLGWDAVAANLIEKGEEAVVLNTGYFSDSFGECLEAYGAKVTHVKAEVGGIPTDDAIISALASKPKLLTITHVDTSTGVLSPADHIASLVKKHSPDTLIALDAVCSVASEEIKFDEWGLDVVLSATQKGLGVPPGLSVVLASKRAVETVEKRKTPIPAYYVSWKKWIPIMQNYESGKPSYFATPPVQLVYALHTSLKSITSAPLADRFKAHKAASAYVKDSLAELGLEFVPKSRDIAANGMTAVRFPKGVKAPDVLPKLAERDIVVAAGLHKAIVSEYFRIGHMGITAVDRQRGDLEKVVKGIKEVL
HMMPanther: PTHR21152	39-418	FAMILY NOT NAMED,AMINOTRANSFERASE CLASS V	VMSDFHQAPHKLLVIPGPIEFSDPVLAANATPGTAHTSPAFIPVFGEALSLLRDVLLSAKESGSQPLLIAGSGTLGWDAVAANLIEKGEEAVVLNTGYFSDSFGECLEAYGAKVTHVKAEVGGIPTDDAIISALASKPKLLTITHVDTSTGVLSPADHIASLVKKHSPDTLIALDAVCSVASEEIKFDEWGLDVVLSATQKGLGVPPGLSVVLASKRAVETVEKRKTPIPAYYVSWKKWIPIMQNYESGKPSYFATPPVQLVYALHTSLKSITSAPLADRFKAHKAASAYVKDSLAELGLEFVPKSRDIAANGMTAVRFPKGVKAPDVLPKLAERDIVVAAGLHKAIVSEYFRIGHMGITAVDRQRGDLEKVVKGIKEVL
superfamily: SSF53383 IPR015424	46-418	PLP-dependent transferases Pyridoxal phosphate-dependent transferase, major d	APHKLLVIPGPIEFSDPVLAANATPGTAHTSPAFIPVFGEALSLLRDVLLSAKESGSQPLLIAGSGTLGWDAVAANLIEKGEEAVVLNTGYFSDSFGECLEAYGAKVTHVKAEVGGIPTDDAIISALASKPKLLTITHVDTSTGVLSPADHIASLVKKHSPDTLIALDAVCSVASEEIKFDEWGLDVVLSATQKGLGVPPGLSVVLASKRAVETVEKRKTPIPAYYVSWKKWIPIMQNYESGKPSYFATPPVQLVYALHTSLKSITSAPLADRFKAHKAASAYVKDSLAELGLEFVPKSRDIAANGMTAVRFPKGVKAPDVLPKLAERDIVVAAGLHKAIVSEYFRIGHMGITAVDRQRGDLEKVVKGIKEVL
Gene3D: G3DSA:3.40.640.10 IPR015421	62-300	no description Pyridoxal phosphate-dependent transferase, major r	PVLAANATPGTAHTSPAFIPVFGEALSLLRDVLLSAKESGSQPLLIAGSGTLGWDAVAANLIEKGEEAVVLNTGYFSDSFGECLEAYGAKVTHVKAEVGGIPTDDAIISALASKPKLLTITHVDTSTGVLSPADHIASLVKKHSPDTLIALDAVCSVASEEIKFDEWGLDVVLSATQKGLGVPPGLSVVLASKRAVETVEKRKTPIPAYYVSWKKWIPIMQNYESGKPSYFATPPVQLV
HMMPfam: PF00266 IPR000192	106-385	Aminotran_5 Aminotransferase, class V/Cysteine desulfurase	LIAGSGTLGWDAVAANLIEKGEEAVVLNTGYFSDSFGECLEAYGAKVTHVKAEVGGIPTDDAIISALASKPKLLTITHVDTSTGVLSPADHIASLVKKHSPDTLIALDAVCSVASEEIKFDEWGLDVVLSATQKGLGVPPGLSVVLASKRAVETVEKRKTPIPAYYVSWKKWIPIMQNYESGKPSYFATPPVQLVYALHTSLKSITSAPLADRFKAHKAASAYVKDSLAELGLEFVPKSRDIAANGMTAVRFPKGVKAPDVLPKLAERDIVVAAGLHKAI
PatternScan: PS00595 IPR020578	230-250	AA_TRANSFER_CLASS_5 Aminotransferase class-V pyridoxal-phosphate bindi	LDVVLSATQKGLGVPPGLSVV
Gene3D: G3DSA:3.90.1150.10 IPR015422	301-420	no description Pyridoxal phosphate-dependent transferase, major r	YALHTSLKSITSAPLADRFKAHKAASAYVKDSLAELGLEFVPKSRDIAANGMTAVRFPKGVKAPDVLPKLAERDIVVAAGLHKAIVSEYFRIGHMGITAVDRQRGDLEKVVKGIKEVLGK

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Analyses

Blast

Blast matches against Reference R-Genes. Show