PRGDB00080093 (Les.14352)
| Les.14352 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 47105592 (BT014177) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Solanum lycopersicum |
DNA Sequence
GAATGGACTAATTATTTTTTATGTACACGCTATGACCAAACCCAAAAAAATTCTTGAGAACTTTTTGAAACCTTTTTTCTCAATCTCCAATAAAGGTATGCAAAAATTCTTGTGTAGGTACCCTTAATCTTGAtttttttttGGTTCTAATGCTGATTTTGGGTTTTTCTCTTGTTGTGAATTGACTAATCAAACAAAAAAGGGAAAAATGAGGAGGACTTAGAGAAAATTGCAGCACAAGAACAGAAGCAATTCCCTTTTGAAGTTCTTGTTTCTGCTACCAAAGATTTTCACCCAGATAACAAGCTTGGTGAAGGTGGATTTGGGCCTGTATTCAAGAAATCAGAAGCTTTTGTTGAAAAAAATTGAATCTTTTTGTGATGCTTGAAGAAAATGAATCTTTCTGTGATTTGGGGGAAATTAAGTGATGGGAGGCAAATAGCTGTAAAGAAGCTTTCACATAGTTCAAGGCAAGGGATGAAGGAATTCAAGAATGAAGCTAAGTTGTTGGCTCGTGTACAACACAGAAATGTGGTGAATTTGTTAGGGTACTGTGTACATGGAGTAGAGAAGTTGCTTGTGTATGAGTATGTTGCTAATGAGAGCCTTGACAAAATCCTCTTCAAATCTGCTAACAGAGATGCGCTCAGCTGGAAGCAACGGCATGACATAATTGTTGGCATTGCTAGAGGGTTGCTATACCTTCATGAAGGATCACATACTTGCATTATCCACCGTGACATAAAAGCTAGCAACATCCTACTTGATGACAAATGGGTGCCCAAGATTGCTGATTTCGGAATGGCTAGACTCTATCCTGAAGATAAAACACATGTTAACACCCGTGTAGCTGGTACTAATGGCTATATGGCGCCCGAGTACGTTATGTATGGACATCTATCAGTGAAGGCTGATGTATTCAGTTTCGGAGTTGTAATTCTGGAGCTCATAAGTGGCCAGAAGAATTCAACCTTTAACAGAGATCCTGATTCTCGAAGCCTTCTTGAATGGGCGTACAGGCTGTACAAGAAGGGTCGGAGCTGGGAGATTATGGACCCTGCACTGGCACAATCGGCTATCCCCGATGAGATAGCAATGTACATACAGATTGGCTTATTATGCATTCAATCGGATCCACCACTACGTCCAACCATACAACAGGTTGTGGTGATGCTATCGAAGAATCCTGGATCTCTTGATAGAGAACCAACTAGACCTGGATATCCCGGATCAAGAATTAGATCTCACAGACCAGGTGGTGGTACGTCACACACAGGTGGAACCTCGGGTGCATCCAATCCTTCCACATTCAGCTCATCGTCTAGTAGCAACACTGTTACTGCAACTGCAAGTTCATCCACACCTACAAGACGGAGATCGGACCCTCATGGTAAACGTCCTGTGAGAGATTAGGCGCGGCGTTGTTGAAGATATTTTCTTAATTCTTTTTGTGTATACATTCAATTTTTGTAGCATGTAAATTGGTTACAAATTGAGTATCAAAGAGTAATGATGAATCTTAGTGACAGTTAACATGTAAAAGAAGTGTATGTAGTTACTCTCAGGAAATAAAACTACCTGGCATAATaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Les.14352 | translated coding region predicted by ESTScan from UniGene Les.14352 | MNLSVIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVMLSKNPGSLDREPTRPGYPGSRIRSHRPGGGTSHTGGTSGASNPSTFSSSSSSNTVTATASSSTPTRRRSDPHGKRPVRD |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| ProfileScan: PS50011 IPR000719
|
1-267 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
MNLSVIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVMLSKNPGS |
| HMMSmart: SM00220 IPR002290
|
3-261 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
LSVIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVML |
| HMMSmart: SM00219 IPR020635
|
4-261 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
SVIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVML |
| HMMPanther: PTHR24420:SF787 | 5-332 | SUBFAMILY NOT NAMED | VIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVMLSKNPGSLDREPTRPGYPGSRIRSHRPGGGTSHTGGTSGASNPSTFSSSSSSNTVTATASSSTPTRRRSDPH |
| HMMPanther: PTHR24420 | 5-332 | FAMILY NOT NAMED,FAMILY NOT NAMED | VIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVMLSKNPGSLDREPTRPGYPGSRIRSHRPGGGTSHTGGTSGASNPSTFSSSSSSNTVTATASSSTPTRRRSDPH |
| superfamily: SSF56112 IPR011009
|
5-261 | Protein kinase-like (PK-like) Protein kinase-like domain
|
VIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVML |
| Gene3D: G3DSA:3.30.200.20 | 5-52 | no description | VIWGKLSDGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLG |
| HMMPfam: PF07714 IPR001245
|
12-260 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase
|
DGRQIAVKKLSHSSRQGMKEFKNEAKLLARVQHRNVVNLLGYCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVM |
| Gene3D: G3DSA:1.10.510.10 | 53-260 | no description | YCVHGVEKLLVYEYVANESLDKILFKSANRDALSWKQRHDIIVGIARGLLYLHEGSHTCIIHRDIKASNILLDDKWVPKIADFGMARLYPEDKTHVNTRVAGTNGYMAPEYVMYGHLSVKADVFSFGVVILELISGQKNSTFNRDPDSRSLLEWAYRLYKKGRSWEIMDPALAQSAIPDEIAMYIQIGLLCIQSDPPLRPTIQQVVVM |
| PatternScan: PS00108 IPR008271
|
112-124 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKASNILL |
| Seg: seg | 288-329 | seg | GGGTSHTGGTSGASNPSTFSSSSSSNTVTATASSSTPTRRRS |
List of Contributions
There has not been any contribution yet.
