PRGDB00080691 (Ptc.463)
| Ptc.463 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 144603362 (CT869252) |
| Gene Class | RLP |
| Domain Type | Ser-Thr Kinase, LRR |
| Gene Species | Dimocarpus longan |
DNA Sequence
GCAGGTGGAAATTTTGGAGCGGTACGCAGTGGTCGTCATGGACTTTGCCCTGCACGACGGCGAGTCACGTGTCGCGAATAATTACGCCTTTATCCCCGCCTGCGATTGGCCTGGAGTGACCTGTATGGACGTGGTGGATTCCAATATTTCGCGCATCACCCAAATCAATTGGGCTCGGATGAACCTCAACGGCGTTCTGCCTACCGAAGTGGCCGTGTTGGAAGATCTCGTCACGCTAGATCTCGCCGAGAACGACATTGAAGGGACGCTCCCCGAAGGACTTTTTACCCTCAAGGATTTGCGGTTCCTTTATTTGCACGATAACGCGTTCACCGGAACACTCTCGGAGAACTTTTCCGAACTGAGCGCCCTGGAATCGCTCTATTTGGGAGACAACGAATTTTCCGGACCCTTTCCCAAGGGACTGGGCTCGCCCAGTTTAGGGGGAGGCGATGCCAACGTGCGGCCTTTGCGTTACTTGAGTTTGTATCGCAACAGCATCACCGGTTCCATTCCGGTCAATATGAACTTGCGGAGGCTCTATCTCTTGGATCTGGGCTACAACGACATGACGGGCACCTTGCCAGCGGACTGGTCAAACGGCGTTAACACCATGAATGCGCTCACATTATTATACCTCAACCACAATTCGTTTCGGGGGACCATTCCAAGTACCTACCCCGAACTTGGGAATGACCGCCTGCAAGTTTACGAACTTAACGACAACCAACTCACAGGTGAAGTACCGGGTGGGTATGTGGTTCGCAATCTTTTACAGTCGGTGGAGATGCAGAACAATAACTTTTCGTCGATCAACAATGACGTTTGCAACTTGATTGTCTTTATTGGTGGCGAATCACTAATTTCAAAGCCGATTGTGAAGTGTGGTCCTGCAATTTCTCTCTGGGCCATGAACGCTGCATTTAAAAATGGATGGAATAAGGCGCCGGGTGAAGGAAAAAGCAAGGGACTATGGAATTGAAAAAGGGCCCCCCCTTCttttgacttttttgtattttgtgattttgGTTGTT
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Ptc.463 | translated coding region predicted by ESTScan from UniGene Ptc.463 | XQVEILERYAVVVMDFALHDGESRVANNYAFIPACDWPGVTCMDVVDSNISRITQINWARMNLNGVLPTEVAVLEDLVTLDLAENDIEGTLPEGLFTLKDLRFLYLHDNAFTGTLSENFSELSALESLYLGDNEFSGPFPKGLGSPSLGGGDANVRPLRYLSLYRNSITGSIPVNMNLRRLYLLDLGYNDMTGTLPADWSNGVNTMNALTLLYLNHNSFRGTIPSTYPELGNDRLQVYELNDNQLTGEVPGGYVVRNLLQSVEMQNNNFSSINNDVCNLIVFIGGESLISKPIVKCGPAISLWAMNAAFKNGWNKAPGEGKSKGLWN |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52058 | 26-274 | L domain-like,LRR | ANNYAFIPACDWPGVTCMDVVDSNISRITQINWARMNLNGVLPTEVAVLEDLVTLDLAENDIEGTLPEGLFTLKDLRFLYLHDNAFTGTLSENFSELSALESLYLGDNEFSGPFPKGLGSPSLGGGDANVRPLRYLSLYRNSITGSIPVNMNLRRLYLLDLGYNDMTGTLPADWSNGVNTMNALTLLYLNHNSFRGTIPSTYPELGNDRLQVYELNDNQLTGEVPGGYVVRNLLQSVEMQNNNFSSINN |
| HMMPanther: PTHR24420 | 35-270 | FAMILY NOT NAMED,FAMILY NOT NAMED | CDWPGVTCMDVVDSNISRITQINWARMNLNGVLPTEVAVLEDLVTLDLAENDIEGTLPEGLFTLKDLRFLYLHDNAFTGTLSENFSELSALESLYLGDNEFSGPFPKGLGSPSLGGGDANVRPLRYLSLYRNSITGSIPVNMNLRRLYLLDLGYNDMTGTLPADWSNGVNTMNALTLLYLNHNSFRGTIPSTYPELGNDRLQVYELNDNQLTGEVPGGYVVRNLLQSVEMQNNNFS |
| Gene3D: G3DSA:3.80.10.10 | 47-276 | no description | DSNISRITQINWARMNLNGVLPTEVAVLEDLVTLDLAENDIEGTLPEGLFTLKDLRFLYLHDNAFTGTLSENFSELSALESLYLGDNEFSGPFPKGLGSPSLGGGDANVRPLRYLSLYRNSITGSIPVNMNLRRLYLLDLGYNDMTGTLPADWSNGVNTMNALTLLYLNHNSFRGTIPSTYPELGNDRLQVYELNDNQLTGEVPGGYVVRNLLQSVEMQNNNFSSINNDV |
| Seg: seg | 135-151 | seg | FSGPFPKGLGSPSLGGG |
| HMMPfam: PF00560 IPR001611
|
158-175 | LRR_1 Leucine-rich repeat
|
LRYLSLYRNSITGSIPVN |
List of Contributions
There has not been any contribution yet.
