PRGDB00150862 (Cucsa.009200.1)

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Cucsa.009200.1
Gene Type Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Pennisetum glaucum

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Protein kinase superfamily protein (best arabidopsis hit)

DNA Sequence

ATGACGAAGTCCAAGAGTTTCGTACAAAATCTCATCAAACAATTCAGATTCGGCTCCTCAAGAGATAGGCAGGGTGAGGATGATTTGGAGGAGATTGCTGCTAAGGAACAGAAGCTTATTCAGTTTGATGCCTTAGTTGAAGCTACCAACAACTTTCACTCCACCAACAAGCTTGGCCAAGGCGGATTTGGTCCTGTTTACAAGGGGAAGTTAAAGGATGGAAGAGTTATTGCAGTCAAGAAGTTGTCACTTTATTCAAAACAAGGGAGAAAAGAGTTTATGACTGAGGCTAAATTGTTGGCTCGAGTGCAGCACAGAAATGTCGTCAATTTGTTGGGATACTGTGTGCATGGTGCAGAGAAACTACTGGTTTACGAATACGTCATGAATGAGAGCCTCGACAAGCTTCTCTTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAGGAGATATGACATAATCTTTGGCGTAGCACGAGGGTTGCAATATCTTCATGTAGACTCACATAACGTCATTATCCATCGTGACATAAAGGCTAGTAACATTTTGTTGGATGACAAATGGGTTCCTAAAATTGCGGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGAGTTGCTGGTACAAATGGATATATGGCTCCCGAATATGTAATGCACGGGCATCTATCAGTAAAGGCAGACGTTTTTAGCTTTGGAGTTTTGGTTTTGGAACTTATAAGTGGCCAGCGAAATTCGTCATTTACTTCATTTATGGATGCGGAGAATCTACTTGATTGGGCTTACAAACTGTACAAGAAGGGAAGAAGCTTGGAGATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAAATAGGATTGCTCTGCACACAAGGTGATTCACACCTACGGCCGACCATGCCACGTGTAGTTTTAATTCTTTCAAAGAGACCTGGTAATTTGGAGGAACCAACGAGACCGGGAATGCCCGGTTCTCGGTATAGAAGAACTCGTAGGACAAGTGCATCGTCCTCCATTGTGGGTACTTCGGGAACTTCGTCTGGTGTATCCGACTCCTATGCTTTGACAACCAATACTACTGGAACTATAACTGCTACGGCGACCGCAACCGCAACTGCAAATGAAGTTGCTTCTAGCTCTTCTCCAATTAGTCGAAGATACGATACTCGTGGGAAACGTCCAATAGAAGGTTAG


Protein sequences

Name Description Sequence
Cucsa.009200.1 Protein kinase superfamily protein (best arabidopsis hit)

MTKSKSFVQNLIKQFRFGSSRDRQGEDDLEEIAAKEQKLIQFDALVEATNNFHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLEEPTRPGMPGSRYRRTRRTSASSSIVGTSGTSSGVSDSYALTTNTTGTITATATATATANEVASSSSPISRRYDTRGKRPIEG*

Domains

Domain Start-End Description Sequence

HMMPanther: PTHR24420
17-406 FAMILY NOT NAMED,FAMILY NOT NAMED

FGSSRDRQGEDDLEEIAAKEQKLIQFDALVEATNNFHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLEEPTRPGMPGSRYRRTRRTSASSSIVGTSGTSSGVSDSYALTTNTTGTITATATATATANEVASSSSPISRRYDTRG

HMMPanther: PTHR24420:SF787
17-406 SUBFAMILY NOT NAMED

FGSSRDRQGEDDLEEIAAKEQKLIQFDALVEATNNFHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLEEPTRPGMPGSRYRRTRRTSASSSIVGTSGTSSGVSDSYALTTNTTGTITATATATATANEVASSSSPISRRYDTRG

superfamily: SSF56112
IPR011009
22-330 Protein kinase-like (PK-like)
Protein kinase-like domain

DRQGEDDLEEIAAKEQKLIQFDALVEATNNFHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLE

Gene3D: G3DSA:3.30.200.20
35-113 no description

KEQKLIQFDALVEATNNFHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLG

HMMSmart: SM00220
IPR002290
52-321 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

FHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLI

HMMSmart: SM00219
IPR020635
52-322 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

FHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLIL

ProfileScan: PS50011
IPR000719
52-328 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FHSTNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGN

HMMPfam: PF07714
IPR001245
54-297 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

STNKLGQGGFGPVYKGKLKDGRVIAVKKLSLYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMC

Gene3D: G3DSA:1.10.510.10
114-254 no description

YCVHGAEKLLVYEYVMNESLDKLLFKSSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSS

PatternScan: PS00108
IPR008271
173-185 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDIKASNILL

Seg: seg
340-367 seg

SRYRRTRRTSASSSIVGTSGTSSGVSDS

Seg: seg
369-388 seg

ALTTNTTGTITATATATATA






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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