PRGDB00150864 (Cucsa.009200.3)
| Cucsa.009200.3 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGACTGAGGCTAAATTGTTGGCTCGAGTGCAGCACAGAAATGTCGTCAATTTGTTGGGATACTGTGTGCATGGTGCAGAGAAACTACTGGTTTACGAATACGTCATGAATGAGAGCCTCGACAAGCTTCTCTTTACAGAATCCAGCAGACGAGGAGAACTTGATTGGAAGAGGAGATATGACATAATCTTTGGCGTAGCACGAGGGTTGCAATATCTTCATGTAGACTCACATAACGTCATTATCCATCGTGACATAAAGGCTAGTAACATTTTGTTGGATGACAAATGGGTTCCTAAAATTGCGGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGAGTTGCTGGTACAAATGGATATATGGCTCCCGAATATGTAATGCACGGGCATCTATCAGTAAAGGCAGACGTTTTTAGCTTTGGAGTTTTGGTTTTGGAACTTATAAGTGGCCAGCGAAATTCGTCATTTACTTCATTTATGGATGCGGAGAATCTACTTGATTGGGCTTACAAACTGTACAAGAAGGGAAGAAGCTTGGAGATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAAATAGGATTGCTCTGCACACAAGGTGATTCACACCTACGGCCGACCATGCCACGTGTAGTTTTAATTCTTTCAAAGAGACCTGGTAATTTGGAGGAACCAACGAGACCGGGAATGCCCGGTTCTCGGTATAGAAGAACTCGTAGGACAAGTGCATCGTCCTCCATTGTGGGTACTTCGGGAACTTCGTCTGGTGTATCCGACTCCTATGCTTTGACAACCAATACTACTGGAACTATAACTGCTACGGCGACCGCAACCGCAACTGCAAATGAAGTTGCTTCTAGCTCTTCTCCAATTAGTCGAAGATACGATACTCGTGGGAAACGTCCAATAGAAGGTTAG
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.009200.3 | Protein kinase superfamily protein (best arabidopsis hit) | MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLEEPTRPGMPGSRYRRTRRTSASSSIVGTSGTSSGVSDSYALTTNTTGTITATATATATANEVASSSSPISRRYDTRGKRPIEG* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-314 | FAMILY NOT NAMED,FAMILY NOT NAMED | MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLEEPTRPGMPGSRYRRTRRTSASSSIVGTSGTSSGVSDSYALTTNTTGTITATATATATANEVASSSSPISRRYDTRG |
| HMMSmart: SM00219 IPR020635
|
1-230 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLIL |
| superfamily: SSF56112 IPR011009
|
1-238 | Protein kinase-like (PK-like) Protein kinase-like domain
|
MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLE |
| HMMSmart: SM00220 IPR002290
|
1-229 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLI |
| ProfileScan: PS50011 IPR000719
|
1-236 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGN |
| Gene3D: G3DSA:3.30.200.20 | 1-35 | no description | MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYV |
| HMMPanther: PTHR24420:SF787 | 1-314 | SUBFAMILY NOT NAMED | MTEAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVVLILSKRPGNLEEPTRPGMPGSRYRRTRRTSASSSIVGTSGTSSGVSDSYALTTNTTGTITATATATATANEVASSSSPISRRYDTRG |
| HMMPfam: PF00069 IPR000719
|
3-164 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
EAKLLARVQHRNVVNLLGYCVHGAEKLLVYEYVMNESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFT |
| Gene3D: G3DSA:1.10.510.10 | 38-227 | no description | ESLDKLLFTESSRRGELDWKRRYDIIFGVARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSFGVLVLELISGQRNSSFTSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDSHLRPTMPRVV |
| PatternScan: PS00108 IPR008271
|
81-93 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDIKASNILL |
| Seg: seg | 248-275 | seg | SRYRRTRRTSASSSIVGTSGTSSGVSDS |
| Seg: seg | 277-296 | seg | ALTTNTTGTITATATATATA |
List of Contributions
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