PRGDB00150870 (Cucsa.010860.2)

Cucsa.010860.2
Gene Type	Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class	Unknown
Domain Type	Ser-Thr Kinase
Gene Species	Pennisetum glaucum
	Comment?

Protein kinase superfamily protein (best arabidopsis hit)

DNA Sequence

ATGGGGTCCTGCCTTAGTGCTAGAATTAAAGCTGAGAGCCCTCTTCACAACGGGTTGAGCTCCAGGTATGCAAGAGATGGAAATGATAAAGGGAATTCAACCAGCAAGTCATCTGTCTCGACCCCTCGGACCCCTCGAACGGAGGGCGAGATCTTGCAGTCCTCCAACTTGAAAAACTTCTCCTACAATGAGCTTAAAGCTGCCACCCGAAACTTCCGTCCTGATAGTGTATTGGGTGAGGGTGGATTTGGTTCTGTATTTAAGGGGTGGATTGATGAACAGTCCTTTGCAGTTACGAAGCCCGGGACTGGCTTAGTCATTGCAGTAAAAAGGCTCAACCAGGAAGGTTTCCAGGGTCATAGAGAATGGCTGACAGAAATTGACTATCTAGGCCAGCTGCATCATCCTAATCTTGTGAGATTGATTGGCTTTTGCTTAGAGGATGAGCATCGACTTCTTGTATATGAATTTATGCCTCGTGGCAGCTTGGAAAATCATCTATTTAGGAGGAGTTCTCACTTTCAACCTCTATCATGGAGTCTCCGATTGAAAGTTGCTCTTGGTGCTGCTAAAGGTCTAGCTTTTCTACATAGCGATGAAGCGAAAGTAATATACCGGGACTTTAAAAGCTCTAATATCTTGCTGGATTCGGACTATAATGCAAAACTCTCTGATTTTGGATTAGCCAAAGATGGGCCTACAGGTGACAGAAGCTATGTTTCTACAAGGGTAATGGGAACATTTGGCTATGCAGCTCCTGAATATATGATCACAGCCAAGAGTGATGTGTATAGCTTTGGAGTTGTTCTTCTCGAGATCCTATCAGGGAGACGAGCTATAGACAAAAACCGACCATCTGGAGAACACAACCTTGTGGAATGGGCAAAACCTTACCTCACTAGCAAACGAAGAGTACTTCAAATGTTGGACGCACGAATTGAAGGCCAATATTCGACCGGAGGAGCACTAAAAGCGGCTAAACTTGCCATTCAATGTATATCGACAGAACCTAAGTTAAGACCGAACATGAATGCAGTCGTGAAAGCATTGGAACAACTTCAGGATTCGAGTGAAACGAGTGGATCAAGGGGAACTTTAAGCGAACCCTTGAACACATCCAGCCAAGGCAGTGGCTCCACAAATAACAAACCTGTTTCTTATCCTAGACCATCAGCTTCAGTACTAAATCTATAG

Protein sequences

Name	Description	Sequence
Cucsa.010860.2	Protein kinase superfamily protein (best arabidopsis hit)	MGSCLSARIKAESPLHNGLSSRYARDGNDKGNSTSKSSVSTPRTPRTEGEILQSSNLKNFSYNELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQLQDSSETSGSRGTLSEPLNTSSQGSGSTNNKPVSYPRPSASVLNL*

Domains

Domain	Start-End	Description	Sequence
HMMPanther: PTHR24420	42-360	FAMILY NOT NAMED,FAMILY NOT NAMED	PRTPRTEGEILQSSNLKNFSYNELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQLQDSSETS
superfamily: SSF56112 IPR011009	42-358	Protein kinase-like (PK-like) Protein kinase-like domain	PRTPRTEGEILQSSNLKNFSYNELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQLQDSSE
HMMPanther: PTHR24420:SF861	42-360	SUBFAMILY NOT NAMED	PRTPRTEGEILQSSNLKNFSYNELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQLQDSSETS
Gene3D: G3DSA:3.30.200.20	53-144	no description	QSSNLKNFSYNELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGF
HMMSmart: SM00219 IPR020635	72-350	Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain	FRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKAL
HMMSmart: SM00220 IPR002290	72-353	Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas	FRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQL
ProfileScan: PS50011 IPR000719	72-353	PROTEIN_KINASE_DOM Protein kinase, catalytic domain	FRPDSVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQL
HMMPfam: PF07714 IPR001245	76-350	Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic	SVLGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVKRLNQEGFQGHREWLTEIDYLGQLHHPNLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKAL
PatternScan: PS00107 IPR017441	78-110	PROTEIN_KINASE_ATP Protein kinase, ATP binding site	LGEGGFGSVFKGWIDEQSFAVTKPGTGLVIAVK
Gene3D: G3DSA:1.10.510.10	145-354	no description	CLEDEHRLLVYEFMPRGSLENHLFRRSSHFQPLSWSLRLKVALGAAKGLAFLHSDEAKVIYRDFKSSNILLDSDYNAKLSDFGLAKDGPTGDRSYVSTRVMGTFGYAAPEYMITAKSDVYSFGVVLLEILSGRRAIDKNRPSGEHNLVEWAKPYLTSKRRVLQMLDARIEGQYSTGGALKAAKLAIQCISTEPKLRPNMNAVVKALEQLQ
Seg: seg	181-194	seg	LRLKVALGAAKGLA
PatternScan: PS00108 IPR008271	203-215	PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site	VIYRDFKSSNILL
Seg: seg	371-382	seg	NTSSQGSGSTNN

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Analyses

Blast

Blast matches against Reference R-Genes. Show