PRGDB00150871 (Cucsa.011220.1)
| Cucsa.011220.1 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGTTATCCAAAGTTCAACACAAGAATCTTGCAAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTAACTGAGCTTCTTTCAGGCGGAACTTTACGGAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAGTGAGGCAGTTGGCTTTGCACTTGATATTGCCCGTGCAATGGACTGCTTACATTCCCATGGGATCATTCACCGTGACCTCAAACCTGAGAATTTGATCTTGACTGCAGATCACAAAACTGTTAAACTTGCTGATTTTGGCCTTGCTAGAGAAGAGTCAGTAACAGAGATGATGACAGCTGAAACTGGGACTTACAGATGGATGGCTCCAGAGCTATACAGTACAGTCACTCTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTATAGCTTTGGAATTGTATTCTGGGAGATTATCCAAAACAAGTTGCCTTTTGAAGGCATGTCAAATCTACAAGCCGCATATGCGGCTGCTTTTAAGAATTTACGACCGAGTGCCGAGAACCTCCCAGCGGATTTGGCACCAATTGTGACTTCCTGTTGGAAAGAGGATCCGAATGATCGGCCTAACTTCAACCAAATCATACAGATGCTCTTTAAATGTCTATCCACCATTCCACAACCAGAATATGTTCCACCACCAACTATGCACCCACCTGATAATGCAGTGCTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAACCACGAGACATGGCACCGGGGAAGTCATGAACAGTGAAATAGGAGAGAAACCGACCGGTTTATTCTCGTGTTTCGCTGGTAACTGTTACTGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.011220.1 | Protein kinase superfamily protein (best arabidopsis hit) | MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLFKCLSTIPQPEYVPPPTMHPPDNAVLPPESPGTSSLMATTRHGTGEVMNSEIGEKPTGLFSCFAGNCY* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Gene3D: G3DSA:3.30.200.20 | 1-59 | no description | MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIA |
| ProfileScan: PS50011 IPR000719
|
1-212 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLFK |
| superfamily: SSF56112 IPR011009
|
1-233 | Protein kinase-like (PK-like) Protein kinase-like domain
|
MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLFKCLSTIPQPEYVPPPTMHPPDN |
| HMMPanther: PTHR23257:SF83 IPR015784
|
1-248 | PROTEIN KINASE ATN1 Serine/threonine-protein kinase, ATN1-like
|
MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLFKCLSTIPQPEYVPPPTMHPPDNAVLPPESPGTSSLMA |
| HMMSmart: SM00220 IPR002290
|
1-212 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLFK |
| HMMPanther: PTHR23257 | 1-248 | FAMILY NOT NAMED,Ser-thr,SERINE-THREONINE PROTEIN KINASE | MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLFKCLSTIPQPEYVPPPTMHPPDNAVLPPESPGTSSLMA |
| HMMPfam: PF07714 IPR001245
|
1-210 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQML |
| HMMSmart: SM00219 IPR020635
|
1-210 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
MLSKVQHKNLAKFIGACKEPIMVIVTELLSGGTLRKYLLSIRPRCLDFSEAVGFALDIARAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQML |
| FPrintScan: PR00109 IPR001245
|
26-39 | TYRKINASE Serine-threonine/tyrosine-protein kinase catalytic
|
TELLSGGTLRKYLL |
| Gene3D: G3DSA:1.10.510.10 | 60-211 | no description | RAMDCLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPADLAPIVTSCWKEDPNDRPNFNQIIQMLF |
| FPrintScan: PR00109 IPR001245
|
64-82 | TYRKINASE Serine-threonine/tyrosine-protein kinase catalytic
|
CLHSHGIIHRDLKPENLIL |
| PatternScan: PS00108 IPR008271
|
70-82 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDLKPENLIL |
| FPrintScan: PR00109 IPR001245
|
138-160 | TYRKINASE Serine-threonine/tyrosine-protein kinase catalytic
|
VDVYSFGIVFWEIIQNKLPFEGM |
| FPrintScan: PR00109 IPR001245
|
181-203 | TYRKINASE Serine-threonine/tyrosine-protein kinase catalytic
|
LPADLAPIVTSCWKEDPNDRPNF |
List of Contributions
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