PRGDB00150878 (Cucsa.012060.1)
| Cucsa.012060.1 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Pennisetum glaucum |
DNA Sequence
ATGTTTTTCGACGCCGCCCCTCTCTCCATCCTCCTCCTCTTACCTCTGGCCTCCGCCCAACCCACAACAAACCCCCGCAAATTCTCCTCCTTCTCAATTTCCCAATCTCCATGGCGGCCCACCCAGAACCTCACTCTCCTTTCCCCCAACTCCCTTTTCGCCGCCGGCTTCCACCCACTACCCAACAACTCCAATCTCTTCATCTTCTCCGTTTGGTACTTCAACATCTCAACCGACAACGTCGTCTGGTCCGCCAACCGTCTTCATCCGGTCAACCGTTCAGCAGCTCTGGTCATCACAGCCACCGGCCAGCTCCGTCTCAACGACGCCTCCGGTCGCAACCTCTGGCCTTCCAACAATGTCTCAGCCCATTCAAACTCGACCCAATTAATCCTTCGCGACGATGGTGACTTGATTTACGGCACATGGGAAAGCTTCCAATTCCCCACCAATACTTTCTTGCCTAATCATACATTTAATGGAACCTCAATCGTCTCCAACAACGGCAAATATTCGTTTGTAAACTCTGCTAATTTGACGTTTGGTACAGAGACTTATTGGTCCTCTGGAAATCCATTCCAGAATTTTCAAATTGATGGTCAAATTATCATAAACAATCAAATCCCAGTTATCCCTTCTGATTTTAACTCGACCCGGTTCCGGAAATTGGTTCTTGATGATGATGGGAACCTCAGGATTTTTAGTTTCAACCCCAATTGGCCTCGGTGGGATGTAGTTTGGCAAGCACATGTAGAGTTGTGTCAAATTTTAGATACTTGTGGCCCAAATTCTGTCTGTATGAGTAGTGGCAGTTACAATTCCACTTATTGTGTCTGCGCACCCGGATTCAGCCCCAATCCTCGAGGAGGAGCGCGGCAGGGATGCCACCGGAAACTCAACGTATCAAACAAACCCAAGTTTCTTCAACTGGATTTTGTGAATTTCAGAGGCGGGGTTAAACAAATCTCTTTGCAAACTCCAAATATTTCAGTCTGTCAAGCGGATTGCTTGAAGAATTCGAGCTGCGTGGGCTATACATTCAGCTTCGACGGCAACGGCAACGCCCACGCCCAGTGTGTGCTTCAGCTAGACATTTTGTCGAACGGGTTGTGGTCTCCTGGGATGAAGGCAGCTGCCTTTGTGAAGGTCGACAATTCGGAAACAGATCGCTCAAATTTCACCGGAATGATGTACAAACTCCAAACTACATGTCCAGTTCGCATAACCCTCCGGCCCCCACCGGTAAATAAAGACAACACCACCAGAAACATATTGATAATCAGTACCATATTCGTTGCCGAACTAATTACCGGTGCAGTTTTCTTCTGGGCATTCTTGAAGAGATTTGTAAAATACAGAGACATGGCTCGCACTCTTGGTCTCGAATCACTTCCCGCCGGCGGCCCAAAGCGGTTCAATTATGCCGAGCTAAAGACGGCCACAAACGACTTCTCGACCTGCATCGGAAGAGGGGGATTCGGCGAAGTCTTCAAGGGGGAGCTGCCAGACAAACGTGTGGTAGCCGTCAAGTGCTTGAAAAACGTCGCGGGAGGTGACCGTGACTTTTGGGCGGAGGTCACCATCATCGCGAGGATGCACCATCTTAACTTGCTTCGATTATGGGGATTCTGCGCAGAAAAGGGTCAGAGAATTTTAGTATACGAACATATCCCGAATGGATCGCTGGACAAATTCCTGTTTGTGAAGCATTCACCTTCCGATTCGGAGAAGGAGGAAAGAGAGACGGAAGAAGAAAGGTCACCGCTGGATTGGAGCATACGGTACCGAATCGCCATCGGAGTAGCGAGAGCAATCGCGTACTTGCACGAGGAATGCTTGGAATGGGTGTTGCATCGAGACATAAAACCAGAGAACATCCTTCTAGACAACGATTTCTGCCCGAAGTTATCAGATTTCGGGTTGTCGAAGTTGAGGAAAAACGAGGAGACAACAGTGAGTATGTCTCGGATCAGAGGGACGCCTGGATATGTAGCACCGGAGCTGGTGAAATTGGGTTCAAATTCAATAACGACGAAGGCAGATGTGTACAGTTTCGGGATGGTGCTGCTGGAGATAATCAGCGGGACAAGGAATTTTGAGATAAAGAGATGGACAGTGGAGAGTGCAGATTGGTACTTTCCAGGATGGGCATTCGAGAAGGCGTTCGTGGAGGAGAAGATGAAGGAGATATTAGACGGTCGGATAAGGGAAGAATACGAGAGGGGGGGTAATGTATGTATTGTTAATCGAATGGTGGAAACGGCGATGTGGTGTCTTCAAAACCAACCGGAGAAGAGACCGTCGATGGGGAAAGTGGTGAAGATGTTGGAAGGGAAGCTTGAAATTCCTCCTCCAGAAAAGCCTTCTATTTACTTCTTGTCTCAATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Cucsa.012060.1 | lectin protein kinase family protein (best arabidopsis hit) | MFFDAAPLSILLLLPLASAQPTTNPRKFSSFSISQSPWRPTQNLTLLSPNSLFAAGFHPLPNNSNLFIFSVWYFNISTDNVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFPTNTFLPNHTFNGTSIVSNNGKYSFVNSANLTFGTETYWSSGNPFQNFQIDGQIIINNQIPVIPSDFNSTRFRKLVLDDDGNLRIFSFNPNWPRWDVVWQAHVELCQILDTCGPNSVCMSSGSYNSTYCVCAPGFSPNPRGGARQGCHRKLNVSNKPKFLQLDFVNFRGGVKQISLQTPNISVCQADCLKNSSCVGYTFSFDGNGNAHAQCVLQLDILSNGLWSPGMKAAAFVKVDNSETDRSNFTGMMYKLQTTCPVRITLRPPPVNKDNTTRNILIISTIFVAELITGAVFFWAFLKRFVKYRDMARTLGLESLPAGGPKRFNYAELKTATNDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKMLEGKLEIPPPEKPSIYFLSQ* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 5-19 | seg | AAPLSILLLLPLASA |
| HMMPanther: PTHR24420 | 23-788 | FAMILY NOT NAMED,FAMILY NOT NAMED | TNPRKFSSFSISQSPWRPTQNLTLLSPNSLFAAGFHPLPNNSNLFIFSVWYFNISTDNVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFPTNTFLPNHTFNGTSIVSNNGKYSFVNSANLTFGTETYWSSGNPFQNFQIDGQIIINNQIPVIPSDFNSTRFRKLVLDDDGNLRIFSFNPNWPRWDVVWQAHVELCQILDTCGPNSVCMSSGSYNSTYCVCAPGFSPNPRGGARQGCHRKLNVSNKPKFLQLDFVNFRGGVKQISLQTPNISVCQADCLKNSSCVGYTFSFDGNGNAHAQCVLQLDILSNGLWSPGMKAAAFVKVDNSETDRSNFTGMMYKLQTTCPVRITLRPPPVNKDNTTRNILIISTIFVAELITGAVFFWAFLKRFVKYRDMARTLGLESLPAGGPKRFNYAELKTATNDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKMLEGKLEIPPPEKP |
| HMMPanther: PTHR24420:SF576 | 23-788 | OS10G0101000 PROTEIN | TNPRKFSSFSISQSPWRPTQNLTLLSPNSLFAAGFHPLPNNSNLFIFSVWYFNISTDNVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFPTNTFLPNHTFNGTSIVSNNGKYSFVNSANLTFGTETYWSSGNPFQNFQIDGQIIINNQIPVIPSDFNSTRFRKLVLDDDGNLRIFSFNPNWPRWDVVWQAHVELCQILDTCGPNSVCMSSGSYNSTYCVCAPGFSPNPRGGARQGCHRKLNVSNKPKFLQLDFVNFRGGVKQISLQTPNISVCQADCLKNSSCVGYTFSFDGNGNAHAQCVLQLDILSNGLWSPGMKAAAFVKVDNSETDRSNFTGMMYKLQTTCPVRITLRPPPVNKDNTTRNILIISTIFVAELITGAVFFWAFLKRFVKYRDMARTLGLESLPAGGPKRFNYAELKTATNDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKMLEGKLEIPPPEKP |
| ProfileScan: PS50927 IPR001480
|
37-153 | BULB_LECTIN Bulb-type lectin domain
|
PWRPTQNLTLLSPNSLFAAGFHPLPNNSNLFIFSVWYFNISTDNVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFPTNTF |
| HMMSmart: SM00108 IPR001480
|
41-149 | Bulb-type mannose-specific lectin Bulb-type lectin domain
|
TQNLTLLSPNSLFAAGFHPLPNNSNLFIFSVWYFNISTDNVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFP |
| superfamily: SSF51110 IPR001480
|
63-245 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
NSNLFIFSVWYFNISTDNVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFPTNTFLPNHTFNGTSIVSNNGKYSFVNSANLTFGTETYWSSGNPFQNFQIDGQIIINNQIPVIPSDFNSTRFRKLVLDDDGNLRIFSFNPNWPRWDV |
| HMMPfam: PF01453 IPR001480
|
80-168 | B_lectin Bulb-type lectin domain
|
NVVWSANRLHPVNRSAALVITATGQLRLNDASGRNLWPSNNVSAHSNSTQLILRDDGDLIYGTWESFQFPTNTFLPNHTFNGTSIVSNN |
| Seg: seg | 194-212 | seg | QNFQIDGQIIINNQIPVIP |
| HMMPfam: PF00954 IPR000858
|
216-286 | S_locus_glycop S-locus glycoprotein
|
NSTRFRKLVLDDDGNLRIFSFNPNWPRWDVVWQAHVELCQILDTCGPNSVCMSSGSYNSTYCVCAPGFSPN |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
218-241 | no description Bulb-type lectin domain
|
TRFRKLVLDDDGNLRIFSFNPNWP |
| ProfileScan: PS50026 IPR000742
|
250-290 | EGF_3 Epidermal growth factor-like domain
|
HVELCQILDTCGPNSVCMSSGSYNSTYCVCAPGFSPNPRGG |
| ProfileScan: PS50948 IPR003609
|
295-385 | PAN Apple-like
|
CHRKLNVSNKPKFLQLDFVNFRGGVKQISLQTPNISVCQADCLKNSSCVGYTFSFDGNGNAHAQCVLQLDILSNGLWSPGMKAAAFVKVDN |
| superfamily: SSF56112 IPR011009
|
454-784 | Protein kinase-like (PK-like) Protein kinase-like domain
|
DMARTLGLESLPAGGPKRFNYAELKTATNDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKMLEGKLEIPP |
| Gene3D: G3DSA:3.30.200.20 | 467-557 | no description | GGPKRFNYAELKTATNDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHI |
| HMMSmart: SM00220 IPR002290
|
482-776 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
NDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKML |
| ProfileScan: PS50011 IPR000719
|
482-780 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
NDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKMLEGKL |
| HMMSmart: SM00219 IPR020635
|
482-776 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
NDFSTCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKML |
| HMMPfam: PF00069 IPR000719
|
486-774 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
TCIGRGGFGEVFKGELPDKRVVAVKCLKNVAGGDRDFWAEVTIIARMHHLNLLRLWGFCAEKGQRILVYEHIPNGSLDKFLFVKHSPSDSEKEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVK |
| PatternScan: PS00107 IPR017441
|
488-510 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGRGGFGEVFKGELPDKRVVAVK |
| Seg: seg | 576-586 | seg | EKEERETEEER |
| Gene3D: G3DSA:1.10.510.10 | 577-786 | no description | KEERETEEERSPLDWSIRYRIAIGVARAIAYLHEECLEWVLHRDIKPENILLDNDFCPKLSDFGLSKLRKNEETTVSMSRIRGTPGYVAPELVKLGSNSITTKADVYSFGMVLLEIISGTRNFEIKRWTVESADWYFPGWAFEKAFVEEKMKEILDGRIREEYERGGNVCIVNRMVETAMWCLQNQPEKRPSMGKVVKMLEGKLEIPPPE |
| PatternScan: PS00108 IPR008271
|
616-628 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VLHRDIKPENILL |
List of Contributions
There has not been any contribution yet.
