PRGDB00172524 (ppa014934m)
| ppa014934m | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Prunus persica |
DNA Sequence
ATGATCGGTACTAATTTGCTCTCTCTGTTATTCACACTTTCTTTTGCAGTTGACAGCATTAGTCCCTCCCAGTCTATCCGTGATGGAACGACCTTGGTTTCAAAAGGTGGAAGCTTTGAGCTTGGTTTCTTCAGTCCAGATACTCCCGAGAATCGTTACTTGGGAATTTGGTACAAGAACATCCCAGTTAGAACTGTTGTGTGGGTTGCAAACAGATGCAACCCCATTAATGATTCTTCCGGCATCTTGATGATAAACAGTACGGGACATCTTGTGCTGTTAGGTCAGAATAAGAGTGTCGTTTGGTGGATAAACTCAGCTAAACATGCCCCAAGTGCAACAGTAGAGCTTTTGGATTCTGGGAATTTAGTACTAAGAGATGCAGGAACCTATTTGTGGCAAAGCTTTGACTATCCTTCTGATACGTTGTTACCAGGAATGAAGATGGGATGGGACTTGAGGACAGGTATAAAACGGAGTTTCTCAGCATGGAAAAATTCAGACGACCCGTGTCCAGGAGATTTCACTTATGGGATTGAAATGGAACGTGATACTTATCCTGAGGCATATGTTCGGAAAGGCACTGCAAAATACTATCGTACTGGCCCATGGAATGGCCTGAGATTCAGTGGTTCACCAGAATTAAGGCCTAATCCACTTTATAGTTTCGACTTTGTCTATAATGATGAGGAAGTATACTACATGTACAACCTTCAAAATGAGTCTGTAATCTCAAGAATAGTTTTGAACCAAACCACCAGTACTCGTGATCGCTTGACGTGGATTGAAGCAGATCAAACTTGGAGGGCCTATTCATCAGTACCAAGAGACTGTTGTATCATTGGTGAGAATCCAGTCTGCCAATGTCTAAAAGGATTCAAGCCTAAGTCTCAAGAAAAATGGAATTTGATGGACTGGTCTCTAGGATGTGTGCGCAATAAACCATTAAGCTGCCAGGAAAGATATAAAGATGGCTTTGTCAAATTTGTTGGCTTGAAACTGCCAGATACTACACATTCTTGGGTGAACAAAAGTATGAATCTCAAGGAATGCAGAACCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGATATCAGAGGAGGAGGTACTGGCTGCGCCATCTGGTTTGGTGATCTAATAGATATCAGGCAGTTTCCAGCTGCTGGGCAGGATCTTTATATTCGAATGTTGGCTTCAGAATTAGAAAGTGGTGGTAAAGTGAAGACAGCAATGATAATTGCAGTTTCCGTAGCAGTAGTGTTTTCTGTAGTGCTGTTAGTTGGATATTACCTTCACCGAAACAGGAGAAAATTAAAAGGTACATTAACTACCTTAACCATCTTTGCAAAAAAATTGGAACCAGAGGAGGATCTGGAGCTTCCGCTCTTTGACCTGCCCACAGTAGCTAGTGCCACAGATAACTTTTCAAGCAATAACAAGCTCGGAGAAGGTGGATTTGGACCCGTTTACAGGGGGACACTACTAGATGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCTGGCCAAGGATTGAATGAGTTCAAGAATGAAGTTATACTGATTGCAAAGCTTCAGCATCGAAATCTTGTAAAGCTTCTTGGATTCTGCGTTCAAGGAGAGGAGAAAATGCTGATTTATGAATACATGCCCAACAGAAGCCTGGACTCCTTTATTTTTGATAGTGTGAGAGGAGAACTACTGTTAGATTGGCCTAAACGTTTCCATATTATTTGCGGAGTTGCTCGGGGTCTCCTCTATCTCCATCAGGATTCCAGGCTAAGGATTATTCATCGAGATCTCAAAGCAAGTAATGTTTTACTTGATAATGAAATGAATCCAAAAATTTCAGACTTTGGCTTGGCTAGAACATTAATTGGAGGAGATCAGTCTGGTGGAAATACAAACAGAGTAGTTGGAACATACGGTTATATGGCACCTGAATATGCTATTGATGGGCTGTTTTCTGTCAAATCGGATGTATTTAGCTTTGGTATTTTGGTGCTGGAGGTCATAAGTGGACGGAAAAATAAGGGATTCTACCATCCAAACCACAGTCATAACCTTATTGGACATGCATGGAGAATGTGGATTCAAGGAAGGCCTTTAGAACTGATTGATACGTGTTTAGAAAGCTCATGTACTCTATCGGAAGTGTTACGTTGCGTCCATATTAGTCTCTTATGCGTGCAACATCATCCCGAGGATAGACCAAGCATGGCATCTGTGGTTATCATGCTGGGAAGTGAGATTGCATTGGCTCAGCCCAAACAACCTGGTTTCTTTATAGAAAAGGAATCGCATGAAGTAGGCTCTTCTTCAGGTAATCAAAAATCTTCAACAAACGAAATATCGATTACACTTTTGGAGGGCCGTTAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| ppa014934m | S-locus lectin protein kinase family protein (best arabidopsis hit) | MIGTNLLSLLFTLSFAVDSISPSQSIRDGTTLVSKGGSFELGFFSPDTPENRYLGIWYKNIPVRTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDYPSDTLLPGMKMGWDLRTGIKRSFSAWKNSDDPCPGDFTYGIEMERDTYPEAYVRKGTAKYYRTGPWNGLRFSGSPELRPNPLYSFDFVYNDEEVYYMYNLQNESVISRIVLNQTTSTRDRLTWIEADQTWRAYSSVPRDCCIIGENPVCQCLKGFKPKSQEKWNLMDWSLGCVRNKPLSCQERYKDGFVKFVGLKLPDTTHSWVNKSMNLKECRTKCLNNCSCMAYTSSDIRGGGTGCAIWFGDLIDIRQFPAAGQDLYIRMLASELESGGKVKTAMIIAVSVAVVFSVVLLVGYYLHRNRRKLKGTLTTLTIFAKKLEPEEDLELPLFDLPTVASATDNFSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIMLGSEIALAQPKQPGFFIEKESHEVGSSSGNQKSSTNEISITLLEGR* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| Seg: seg | 4-15 | seg | TNLLSLLFTLSF |
| HMMPanther: PTHR24420:SF703 | 6-795 | SUBFAMILY NOT NAMED | LLSLLFTLSFAVDSISPSQSIRDGTTLVSKGGSFELGFFSPDTPENRYLGIWYKNIPVRTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDYPSDTLLPGMKMGWDLRTGIKRSFSAWKNSDDPCPGDFTYGIEMERDTYPEAYVRKGTAKYYRTGPWNGLRFSGSPELRPNPLYSFDFVYNDEEVYYMYNLQNESVISRIVLNQTTSTRDRLTWIEADQTWRAYSSVPRDCCIIGENPVCQCLKGFKPKSQEKWNLMDWSLGCVRNKPLSCQERYKDGFVKFVGLKLPDTTHSWVNKSMNLKECRTKCLNNCSCMAYTSSDIRGGGTGCAIWFGDLIDIRQFPAAGQDLYIRMLASELESGGKVKTAMIIAVSVAVVFSVVLLVGYYLHRNRRKLKGTLTTLTIFAKKLEPEEDLELPLFDLPTVASATDNFSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIMLGSEIALAQPKQPGFFIEKESHEVGSSSGNQKSSTNEISITLLE |
| HMMPanther: PTHR24420 | 6-795 | FAMILY NOT NAMED,FAMILY NOT NAMED | LLSLLFTLSFAVDSISPSQSIRDGTTLVSKGGSFELGFFSPDTPENRYLGIWYKNIPVRTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDYPSDTLLPGMKMGWDLRTGIKRSFSAWKNSDDPCPGDFTYGIEMERDTYPEAYVRKGTAKYYRTGPWNGLRFSGSPELRPNPLYSFDFVYNDEEVYYMYNLQNESVISRIVLNQTTSTRDRLTWIEADQTWRAYSSVPRDCCIIGENPVCQCLKGFKPKSQEKWNLMDWSLGCVRNKPLSCQERYKDGFVKFVGLKLPDTTHSWVNKSMNLKECRTKCLNNCSCMAYTSSDIRGGGTGCAIWFGDLIDIRQFPAAGQDLYIRMLASELESGGKVKTAMIIAVSVAVVFSVVLLVGYYLHRNRRKLKGTLTTLTIFAKKLEPEEDLELPLFDLPTVASATDNFSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIMLGSEIALAQPKQPGFFIEKESHEVGSSSGNQKSSTNEISITLLE |
| ProfileScan: PS50927 IPR001480
|
17-138 | BULB_LECTIN Bulb-type lectin domain
|
VDSISPSQSIRDGTTLVSKGGSFELGFFSPDTPENRYLGIWYKNIPVRTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDY |
| HMMSmart: SM00108 IPR001480
|
23-139 | Bulb-type mannose-specific lectin Bulb-type lectin domain
|
SQSIRDGTTLVSKGGSFELGFFSPDTPENRYLGIWYKNIPVRTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDYP |
| superfamily: SSF51110 IPR001480
|
48-206 | alpha-D-mannose-specific plant lectins Bulb-type lectin domain
|
TPENRYLGIWYKNIPVRTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDYPSDTLLPGMKMGWDLRTGIKRSFSAWKNSDDPCPGDFTYGIEMERDTYPEAYVRKGTAKYYRTGPWNG |
| HMMPfam: PF01453 IPR001480
|
64-170 | B_lectin Bulb-type lectin domain
|
RTVVWVANRCNPINDSSGILMINSTGHLVLLGQNKSVVWWINSAKHAPSATVELLDSGNLVLRDAGTYLWQSFDYPSDTLLPGMKMGWDLRTGIKRSFSAWKNSDDP |
| Gene3D: G3DSA:2.90.10.10 IPR001480
|
172-211 | no description Bulb-type lectin domain
|
PGDFTYGIEMERDTYPEAYVRKGTAKYYRTGPWNGLRFSG |
| HMMPfam: PF00954 IPR000858
|
199-297 | S_locus_glycop S-locus glycoprotein
|
YRTGPWNGLRFSGSPELRPNPLYSFDFVYNDEEVYYMYNLQNESVISRIVLNQTTSTRDRLTWIEADQTWRAYSSVPRDCCIIGENPVCQCLKGFKPKS |
| HMMPfam: PF08276 IPR013227
|
318-386 | PAN_2 PAN-2 domain
|
CQERYKDGFVKFVGLKLPDTTHSWVNKSMNLKECRTKCLNNCSCMAYTSSDIRGGGTGCAIWFGDLIDI |
| ProfileScan: PS50948 IPR003609
|
318-401 | PAN Apple-like
|
CQERYKDGFVKFVGLKLPDTTHSWVNKSMNLKECRTKCLNNCSCMAYTSSDIRGGGTGCAIWFGDLIDIRQFPAAGQDLYIRML |
| HMMSmart: SM00473 IPR003609
|
321-400 | divergent subfamily of APPLE domains Apple-like
|
RYKDGFVKFVGLKLPDTTHSWVNKSMNLKECRTKCLNNCSCMAYTSSDIRGGGTGCAIWFGDLIDIRQFPAAGQDLYIRM |
| Seg: seg | 418-431 | seg | AVSVAVVFSVVLLV |
| Seg: seg | 445-450 | seg | TLTTLT |
| superfamily: SSF56112 IPR011009
|
449-752 | Protein kinase-like (PK-like) Protein kinase-like domain
|
LTIFAKKLEPEEDLELPLFDLPTVASATDNFSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIML |
| Seg: seg | 456-470 | seg | LEPEEDLELPLFDLP |
| Gene3D: G3DSA:3.30.200.20 | 463-541 | no description | ELPLFDLPTVASATDNFSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGF |
| HMMSmart: SM00220 IPR002290
|
479-752 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
FSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIML |
| HMMSmart: SM00219 IPR020635
|
479-752 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
FSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIML |
| ProfileScan: PS50011 IPR000719
|
479-758 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSSNNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVIMLGSEIAL |
| HMMPfam: PF07714 IPR001245
|
482-750 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
NNKLGEGGFGPVYRGTLLDGQEIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLLGFCVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSMASVVI |
| Gene3D: G3DSA:1.10.510.10 | 542-745 | no description | CVQGEEKMLIYEYMPNRSLDSFIFDSVRGELLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARTLIGGDQSGGNTNRVVGTYGYMAPEYAIDGLFSVKSDVFSFGILVLEVISGRKNKGFYHPNHSHNLIGHAWRMWIQGRPLELIDTCLESSCTLSEVLRCVHISLLCVQHHPEDRPSM |
| PatternScan: PS00108 IPR008271
|
601-613 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
IIHRDLKASNVLL |
List of Contributions
There has not been any contribution yet.
