PRGDB00172577 (ppa026023m)

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ppa026023m
Gene Type Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Prunus persica

Comment?

protein kinase 2B (best arabidopsis hit)

DNA Sequence

ATGGGAAATTGCTTGAGGAAAAAGATTCAAGAGCCAGAGTCACCAGTTGCCATTATTCCAAGGCCTCCCACTGCCACTCCAAGTCCAAAAAATTGGACTTTGGAGACGCTGACTGGGAAGGAAGGAGGGTTCCGGGATTACAAGCTTTACTGCTTTTGTTATAGTTCCTTGAAAGCTGCCACACGCAAATTTAGCAGTAAGAACTTAATCGGACAAGGCGGATTCGGAGATGTCTACAAAGGGTATGTCAGTTATTGCAACATGAACTCCGCTGCAAAACCAAGTGAAGGATTTCCTATTGCTATCAAAAGGCTCAGGAAGACTGGAGCACAAGGCCATGAACAATGGGAGAATGAGAGGAAATTTATGAGCAAAATAAGCCATCCGAACATAGTGAAGCTAATAGGGTACTGCTGCGAAGGTGAGCACAGAATGTTGGTCTATGAGTATATGAGCGGAGGAAGCTTGGAGGCCCAACTCATGACAGAAAATGCTACACAACTAGATTGGAGCAGAAGAATCAAAGTAGCACTTGGGGCTGCCAAGGCTCTGAATTGTCTTCACACTCATAAGACGCCTTTCATTCATCGCGATCTAAAAGCTTCGAATGTTCTGTTGGATGATGACTGGAATGCTAAGCTTTCAGACTTTGGCCTTGCTAAATATGGACCCCGAGATGGCCAGGACCATGTAATGACAAGGATTCTTGGCACCAAAGGCTACATTGCACCTGAATACATAGGGACAGGGCATGTGACACTCAAAACCGATGTATACAGCTTTGGTGTGGTGCTTTTGGAGATTTTGTCAGGCTCCTGTGCCGTGAAGAAATACTCGGATGGGATGGCGGGTGATCTAACCAAGTGGGCTGAACCATATCTTAGCAACAGGCAGAAGCTGCATCATGTGATTGACCAGAGACTTGGAAATAACTTCCCTGTGGAAGAAGCTCACAAGTTTGCTGAGCTCATCCTCCGGTGCCTTGATTCAGACCCCAAGAGCAGACCAACAATGGCTGAAGTTGTGGGTGATTTGGAGCAGTTACAAGAAAACAGAAGCAGCAGCAGCAGCAATCGG


Protein sequences

Name Description Sequence
ppa026023m protein kinase 2B (best arabidopsis hit)

MGNCLRKKIQEPESPVAIIPRPPTATPSPKNWTLETLTGKEGGFRDYKLYCFCYSSLKAATRKFSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDLEQLQENRSSSSSNR

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
34-353 Protein kinase-like (PK-like)
Protein kinase-like domain

LETLTGKEGGFRDYKLYCFCYSSLKAATRKFSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDLEQLQENRS

Gene3D: G3DSA:3.30.200.20
51-136 no description

CFCYSSLKAATRKFSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIG

HMMPanther: PTHR24420
52-350 FAMILY NOT NAMED,FAMILY NOT NAMED

FCYSSLKAATRKFSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDLEQLQE

HMMSmart: SM00220
IPR002290
64-348 Serine/Threonine protein kinases, catalytic
Serine/threonine- / dual-specificity protein kinas

FSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDLEQL

HMMSmart: SM00219
IPR020635
64-345 Tyrosine kinase, catalytic domain
Tyrosine-protein kinase, catalytic domain

FSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDL

ProfileScan: PS50011
IPR000719
64-348 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FSSKNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDLEQL

HMMPfam: PF07714
IPR001245
67-344 Pkinase_Tyr
Serine-threonine/tyrosine-protein kinase catalytic

KNLIGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIKRLRKTGAQGHEQWENERKFMSKISHPNIVKLIGYCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGD

PatternScan: PS00107
IPR017441
70-103 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

IGQGGFGDVYKGYVSYCNMNSAAKPSEGFPIAIK

Gene3D: G3DSA:1.10.510.10
137-354 no description

YCCEGEHRMLVYEYMSGGSLEAQLMTENATQLDWSRRIKVALGAAKALNCLHTHKTPFIHRDLKASNVLLDDDWNAKLSDFGLAKYGPRDGQDHVMTRILGTKGYIAPEYIGTGHVTLKTDVYSFGVVLLEILSGSCAVKKYSDGMAGDLTKWAEPYLSNRQKLHHVIDQRLGNNFPVEEAHKFAELILRCLDSDPKSRPTMAEVVGDLEQLQENRSS

PatternScan: PS00108
IPR008271
194-206 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

FIHRDLKASNVLL






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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