PRGDB00172587 (ppa027155m)
| ppa027155m | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | TNL |
| Domain Type | NBS, TIR, LRR, Others |
| Gene Species | Prunus persica |
DNA Sequence
ATGGCATTGAGCACCCAAAGAGACTCTGCCTTTCTTACTTCACCTGATCAGTCTGCTCCTCAACCGAACCATGATGTGTTTTTGAGTTTCAGGGGTGAGGACACTCGAAATAGCTTTGTATCCCATTTATACCACGAATTGCAGCTCAGGGGCATTAAAACATTCAAGGATGATCCAAAGCTTGAAAGAGGGACAGCTATCTCTTCGGGGCTCTTCAACGCAATCGACGAATCAAGGCTTGCAATCATTGTCCTCTCGCCAAATTACACGTCTTCTTCCTGGTGCTTGGATGAGCTTACAGAGATTCTCCAATGCATGAAATCCAAGAGCACCGTTCTGCCAGTGTTTTATCATGTGGATCCTTCCGACGTACGAAAACAAACCGGTAGTTTTGCGTGCGCATTCACTGAGCATGAAAAAAGGTTTAGGGAAGACATGGAAAAGGTGAAGAGCTGGAGAGCTGCTTTAACTGAAGTGGCCAATTTATCTGGGTTTGATTCAAAGAATGAGTGTGAAAGAAAGCTTATTGAAAAGATTGTTCAACGGGTGTGGAGTAAAACGCATCGCACATTCAAATTGTTGGATTCCACAGACTTTCTTGCTAATGTTAGAGAGGTTTCTCAACGTGGTAATCTTGTTGATCTACAAAGACAACTTCTTTCCCCAATCTTGAAGGATCAAATTACTCAAGTTTGGGATGAACAGTGGGGAATCTCTGTCATTAAGAATTGCTTGTGTAATAAAAAGGTTCTTCTCATTCTTGATGATGTGAGTGAATCAAGCCAACTTGAAAATTTGGCTGGTGAAAAGGATTGGTTTGGTAAGGGGAGTTTAATCATTATTACAACCAGAGATGAACGGTTGCTGTTAAAGCATGATGTGCAGGTATCATATAAGGTAGAGGGATTAGGTGATGATGATGCTCTTGAGCTCTTTAGTCGGAATGCCTTTAAAAAGAATGAGCCTGAGGAAGGTTATTTGGAATTGTCAAAAGGTTTTGTAAATTATGCCAGAGGACTTCCACTAGCTCTTAAACTTTTGGGATGCTTAGTGTATAAGAGAGATCAATATGAATGGAAAAGTGAATTGGATAAGCTGCAGAAAATTCCTAAGTCAGAAATTATTGATTTGCTCAAAATAAGTTACGATGGATTGGATGAGATGAATAAGGATATATTTCTTGATGTTGCATTTTTTCACAAGGGGATGTTCAAGGAGCGTGTAATTGAAATACTAGACTGCTGTGGCCTATGTGGTCATATTGGGATAAATGCTCTTGTTCAGAAATCACTTTTAACTATTGATATTTCAAATAACACGGTTGAGATGCATGATTTGATACAAGAAATGGCATTGGAAATTGTTCGTCGAGAGTGTCCTGAAGAGCCTGGTAGACGAAGTCGATTGTGCAATCATGATGATATCTCTCATGTATTCATAAACAATACGGCATATTCCAATTGTGAAGCCTTGTCTAAGATGCTTAACCTGAGATTTCTTGAATTTGATAATATGATGATTTCTTCAAGCCACGGAATTCTTCCTAATTCCTTGAGAAGTATCAAATGGAGTCGGTATCCTTCCAAATTTCTCCCATCAGATTTTCAACCGAATTTTCTTTTTGCACTTGAGATGCCTAATAGCAAACTTGTTGGGCTTTGGGATGGAAGAAAGGACTTGCCCAACTTGAAAAAAATGAACCTTTGTGGCTCTGAAAACTTGACCACAACCCCAGATTTCTCTGGCATTCCGAATCTTGAGGTGTTAGATTTTCTATTTTGTAAGAATTTGGTTGAGATTCACCCATCAATTGCAGATCTCAAATGTCTAACAACGTTGTCTCTTAGTTTTTGCTCAAAATCGAAAAAGACTCCAGAATTTTCAGGGCAAATGAAAAATGTGTCATGGCTTTGTTTATGTCAGACCTCCATTGAGAAATTATCTTCATCAATAGGATGTCTGGTTGGCCTTACTACTCTGCTTCTGTTGAATTGCAAAAATCTCGAGGGTTTTCCGAGTGAAATTTGTAATTTGAAGTCTCTTGAAGAATTGGATGCATCTAGATGCTCAAAAATTGACAAACTCCCAGAGAATGTGGGGGAGATGGAGTCTCTTACAAAGCTTCGATTTGATATTGGCTGCCTGTCCTCTTTAGCAGAATTCAAGCTTAGTGGAAACAATTTTGTTAGCCTTCCTGCAAGCATTGGATGTCTGTCTAAGCTTAAGTTATTTTGGGTGAATGGGTGCCAAAGGCTTCAACAATTGCCAGATCTTTCTAAGCTTATCTCATTAATGGATATAGACATAGCCGGTTGCACTTCCTTAAAAATGTTACCACATCTTTCGTCAAATTGCTCATTAGTGGATAACAAAATAGGTTATCGTAAGTTTAATTGTGCCAATTGCTTTGTATTGTTTGACAATGAAGGCTACGATAGTATAATACTGAAAATGCTACAGCGATATCTTCAGTGGTTTAGTAATCAAAGTTTGGGACATTCCCTAACTGTGGAGCTACCTACCACGTGGATGGGAATTGCTTTATGTGCTGTGTTTGAAGTTCAGGCTGATCTTTCTGATTTTCATTATTTTCAAATTAGCTGTTTCGCACAAGGATTGCTGCCACATGGAGTATTTTCAAAATATTTTAAAATAGGCGATGTTGTGTCAGATCACCTTTGGGTAATTTATGTATCTCGTAAAGAATTTGAGAAGATATGCGGTCAGATAAAGGTTTTGTTCACAACTTATTATTCTCAAGACATAATGTGGGGAGACAAAAAATCTTGTGTCAAGAAGTGTGGGTTTCGTTTGGTGCACGAGCAAGATGTGGAACAACTCAACCAGATCATGATGAACAAATCCATCATCAAGAGCACTACTACTTGTCCTACCAAATCAGCTGATGCACAAGGTCAACAACGCCACAATGACAAGGATGCTGGTCCTAGTGGAAGTGGTAGCTCTCACCAAAAATCTCTCTTCTGCAATACCTATGCTCTTTCCGAAGAGGCAGACCAAGATGAATTAAAATGA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| ppa027155m | disease resistance protein (TIR-NBS-LRR class), putative (best arabidopsis hit) | MALSTQRDSAFLTSPDQSAPQPNHDVFLSFRGEDTRNSFVSHLYHELQLRGIKTFKDDPKLERGTAISSGLFNAIDESRLAIIVLSPNYTSSSWCLDELTEILQCMKSKSTVLPVFYHVDPSDVRKQTGSFACAFTEHEKRFREDMEKVKSWRAALTEVANLSGFDSKNECERKLIEKIVQRVWSKTHRTFKLLDSTDFLANVREVSQRGNLVDLQRQLLSPILKDQITQVWDEQWGISVIKNCLCNKKVLLILDDVSESSQLENLAGEKDWFGKGSLIIITTRDERLLLKHDVQVSYKVEGLGDDDALELFSRNAFKKNEPEEGYLELSKGFVNYARGLPLALKLLGCLVYKRDQYEWKSELDKLQKIPKSEIIDLLKISYDGLDEMNKDIFLDVAFFHKGMFKERVIEILDCCGLCGHIGINALVQKSLLTIDISNNTVEMHDLIQEMALEIVRRECPEEPGRRSRLCNHDDISHVFINNTAYSNCEALSKMLNLRFLEFDNMMISSSHGILPNSLRSIKWSRYPSKFLPSDFQPNFLFALEMPNSKLVGLWDGRKDLPNLKKMNLCGSENLTTTPDFSGIPNLEVLDFLFCKNLVEIHPSIADLKCLTTLSLSFCSKSKKTPEFSGQMKNVSWLCLCQTSIEKLSSSIGCLVGLTTLLLLNCKNLEGFPSEICNLKSLEELDASRCSKIDKLPENVGEMESLTKLRFDIGCLSSLAEFKLSGNNFVSLPASIGCLSKLKLFWVNGCQRLQQLPDLSKLISLMDIDIAGCTSLKMLPHLSSNCSLVDNKIGYRKFNCANCFVLFDNEGYDSIILKMLQRYLQWFSNQSLGHSLTVELPTTWMGIALCAVFEVQADLSDFHYFQISCFAQGLLPHGVFSKYFKIGDVVSDHLWVIYVSRKEFEKICGQIKVLFTTYYSQDIMWGDKKSCVKKCGFRLVHEQDVEQLNQIMMNKSIIKSTTTCPTKSADAQGQQRHNDKDAGPSGSGSSHQKSLFCNTYALSEEADQDELK* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF52200 IPR000157
|
12-165 | Toll/Interleukin receptor TIR domain Toll/interleukin-1 receptor homology (TIR) domain
|
LTSPDQSAPQPNHDVFLSFRGEDTRNSFVSHLYHELQLRGIKTFKDDPKLERGTAISSGLFNAIDESRLAIIVLSPNYTSSSWCLDELTEILQCMKSKSTVLPVFYHVDPSDVRKQTGSFACAFTEHEKRFREDMEKVKSWRAALTEVANLSGF |
| ProfileScan: PS50104 IPR000157
|
22-162 | TIR Toll/interleukin-1 receptor homology (TIR) domain
|
PNHDVFLSFRGEDTRNSFVSHLYHELQLRGIKTFKDDPKLERGTAISSGLFNAIDESRLAIIVLSPNYTSSSWCLDELTEILQCMKSKSTVLPVFYHVDPSDVRKQTGSFACAFTEHEKRFREDMEKVKSWRAALTEVANL |
| Gene3D: G3DSA:3.40.50.10140 | 23-156 | no description | NHDVFLSFRGEDTRNSFVSHLYHELQLRGIKTFKDDPKLERGTAISSGLFNAIDESRLAIIVLSPNYTSSSWCLDELTEILQCMKSKSTVLPVFYHVDPSDVRKQTGSFACAFTEHEKRFREDMEKVKSWRAAL |
| HMMSmart: SM00255 IPR000157
|
23-162 | Toll Toll/interleukin-1 receptor homology (TIR) domain
|
NHDVFLSFRGEDTRNSFVSHLYHELQLRGIKTFKDDPKLERGTAISSGLFNAIDESRLAIIVLSPNYTSSSWCLDELTEILQCMKSKSTVLPVFYHVDPSDVRKQTGSFACAFTEHEKRFREDMEKVKSWRAALTEVANL |
| HMMPfam: PF01582 IPR000157
|
26-157 | TIR Toll/interleukin-1 receptor homology (TIR) domain
|
VFLSFRGEDTRNSFVSHLYHELQLRGIKTFKDDPKLERGTAISSGLFNAIDESRLAIIVLSPNYTSSSWCLDELTEILQCMKSKSTVLPVFYHVDPSDVRKQTGSFACAFTEHEKRFREDMEKVKSWRAALT |
| HMMPanther: PTHR11017:SF20 | 204-868 | SUBFAMILY NOT NAMED,SUBFAMILY NOT NAMED | REVSQRGNLVDLQRQLLSPILKDQITQVWDEQWGISVIKNCLCNKKVLLILDDVSESSQLENLAGEKDWFGKGSLIIITTRDERLLLKHDVQVSYKVEGLGDDDALELFSRNAFKKNEPEEGYLELSKGFVNYARGLPLALKLLGCLVYKRDQYEWKSELDKLQKIPKSEIIDLLKISYDGLDEMNKDIFLDVAFFHKGMFKERVIEILDCCGLCGHIGINALVQKSLLTIDISNNTVEMHDLIQEMALEIVRRECPEEPGRRSRLCNHDDISHVFINNTAYSNCEALSKMLNLRFLEFDNMMISSSHGILPNSLRSIKWSRYPSKFLPSDFQPNFLFALEMPNSKLVGLWDGRKDLPNLKKMNLCGSENLTTTPDFSGIPNLEVLDFLFCKNLVEIHPSIADLKCLTTLSLSFCSKSKKTPEFSGQMKNVSWLCLCQTSIEKLSSSIGCLVGLTTLLLLNCKNLEGFPSEICNLKSLEELDASRCSKIDKLPENVGEMESLTKLRFDIGCLSSLAEFKLSGNNFVSLPASIGCLSKLKLFWVNGCQRLQQLPDLSKLISLMDIDIAGCTSLKMLPHLSSNCSLVDNKIGYRKFNCANCFVLFDNEGYDSIILKMLQRYLQWFSNQSLGHSLTVELPTTWMGIALCAVFEVQADLSDFHYFQISC |
| HMMPanther: PTHR11017 | 204-868 | FAMILY NOT NAMED,LEUCINE-RICH REPEAT-CONTAINING PROTEIN | REVSQRGNLVDLQRQLLSPILKDQITQVWDEQWGISVIKNCLCNKKVLLILDDVSESSQLENLAGEKDWFGKGSLIIITTRDERLLLKHDVQVSYKVEGLGDDDALELFSRNAFKKNEPEEGYLELSKGFVNYARGLPLALKLLGCLVYKRDQYEWKSELDKLQKIPKSEIIDLLKISYDGLDEMNKDIFLDVAFFHKGMFKERVIEILDCCGLCGHIGINALVQKSLLTIDISNNTVEMHDLIQEMALEIVRRECPEEPGRRSRLCNHDDISHVFINNTAYSNCEALSKMLNLRFLEFDNMMISSSHGILPNSLRSIKWSRYPSKFLPSDFQPNFLFALEMPNSKLVGLWDGRKDLPNLKKMNLCGSENLTTTPDFSGIPNLEVLDFLFCKNLVEIHPSIADLKCLTTLSLSFCSKSKKTPEFSGQMKNVSWLCLCQTSIEKLSSSIGCLVGLTTLLLLNCKNLEGFPSEICNLKSLEELDASRCSKIDKLPENVGEMESLTKLRFDIGCLSSLAEFKLSGNNFVSLPASIGCLSKLKLFWVNGCQRLQQLPDLSKLISLMDIDIAGCTSLKMLPHLSSNCSLVDNKIGYRKFNCANCFVLFDNEGYDSIILKMLQRYLQWFSNQSLGHSLTVELPTTWMGIALCAVFEVQADLSDFHYFQISC |
| HMMPfam: PF00931 IPR002182
|
205-417 | NB-ARC,NBS NB-ARC
|
EVSQRGNLVDLQRQLLSPILKDQITQVWDEQWGISVIKNCLCNKKVLLILDDVSESSQLENLAGEKDWFGKGSLIIITTRDERLLLKHDVQVSYKVEGLGDDDALELFSRNAFKKNEPEEGYLELSKGFVNYARGLPLALKLLGCLVYKRDQYEWKSELDKLQKIPKSEIIDLLKISYDGLDEMNKDIFLDVAFFHKGMFKERVIEILDCCGL |
| superfamily: SSF52540 | 206-374 | P-loop containing nucleoside triphosphate hydrolases | VSQRGNLVDLQRQLLSPILKDQITQVWDEQWGISVIKNCLCNKKVLLILDDVSESSQLENLAGEKDWFGKGSLIIITTRDERLLLKHDVQVSYKVEGLGDDDALELFSRNAFKKNEPEEGYLELSKGFVNYARGLPLALKLLGCLVYKRDQYEWKSELDKLQKIPKSEI |
| FPrintScan: PR00364 IPR000767
|
244-258 | DISEASERSIST Disease resistance protein
|
CLCNKKVLLILDDVS |
| FPrintScan: PR00364 IPR000767
|
337-351 | DISEASERSIST Disease resistance protein
|
ARGLPLALKLLGCLV |
| Seg: seg | 340-350 | seg | LPLALKLLGCL |
| superfamily: SSF52058 | 454-799 | L domain-like,LRR | IVRRECPEEPGRRSRLCNHDDISHVFINNTAYSNCEALSKMLNLRFLEFDNMMISSSHGILPNSLRSIKWSRYPSKFLPSDFQPNFLFALEMPNSKLVGLWDGRKDLPNLKKMNLCGSENLTTTPDFSGIPNLEVLDFLFCKNLVEIHPSIADLKCLTTLSLSFCSKSKKTPEFSGQMKNVSWLCLCQTSIEKLSSSIGCLVGLTTLLLLNCKNLEGFPSEICNLKSLEELDASRCSKIDKLPENVGEMESLTKLRFDIGCLSSLAEFKLSGNNFVSLPASIGCLSKLKLFWVNGCQRLQQLPDLSKLISLMDIDIAGCTSLKMLPHLSSNCSLVDNKIGYRKFNC |
| Gene3D: G3DSA:3.80.10.10 | 486-781 | no description | SNCEALSKMLNLRFLEFDNMMISSSHGILPNSLRSIKWSRYPSKFLPSDFQPNFLFALEMPNSKLVGLWDGRKDLPNLKKMNLCGSENLTTTPDFSGIPNLEVLDFLFCKNLVEIHPSIADLKCLTTLSLSFCSKSKKTPEFSGQMKNVSWLCLCQTSIEKLSSSIGCLVGLTTLLLLNCKNLEGFPSEICNLKSLEELDASRCSKIDKLPENVGEMESLTKLRFDIGCLSSLAEFKLSGNNFVSLPASIGCLSKLKLFWVNGCQRLQQLPDLSKLISLMDIDIAGCTSLKMLPHL |
| Seg: seg | 652-668 | seg | GCLVGLTTLLLLNCKNL |
| FPrintScan: PR00364 IPR000767
|
676-692 | DISEASERSIST Disease resistance protein
|
CNLKSLEELDASRCSKI |
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