PRGDB00182458 (106383)

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106383
Gene Type Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Selaginella moellendorffii

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DNA Sequence

CTCGAGCAAGCTACCGATAAATTTAACATGAGAAACCTGGTTGGGGAAGGCAGCTTTGGTCAAGTGTTTCGGGGGATCCTCACGAATGGCAAGGTGGTTGCTATCAAAAGAATGGATACATTTGCTGGTCAGTGCGCGGAGGCAGAGAAAGAGTTTCGTATCGAGGTTGATTTGCTTAGCCGTATGAACCATCCGCACCTGGTGAGGCTGTTTGGCTACTGTGCGGACGGGAGTCAAAGATTGATTGTCTACGAGTTCATGTCTAATGGTTCACTTGAGAGCTACTTTGCAGGTCGATGCTTATATAGGAGTGGATTCAAACTAGATTTTCGGAGGCGACTGCTAATCTCTTTGGGTTGTGCCAAAGGCTTAGCTTTCCTGCACGCTGGAGGAGAGGATGGCGATCCTATTGTTCACCGCGACTTCAAGTCTTCAAACATTCTTCTCGATTCTTACTTCTCCGCTAAGATATCCGACTTTGGATTTGCCAAGCTTCTTCAAAGGAACCAAAGCCATGCCAGCACCCGCGTGATTGGAACATTTGGCTACTTCGATCCACACTACACGGCAACCGGGCGACTCACCGTGAAAGCGGATGTGTACAGTTTCGGCGTGGTACTCTTGCAGCTACTCACTGGGAAGCCTGCGGTGGTTTCATTTGGAGGGGATGACGTTCCACAAAACATAGTGTCTTGGGCGGAGCCTTGTCTCAATGACAAGAGAAAGCTCAGGAGGATTTTGGACAAAGATTTGGGCTCTACTTACCCACCAAAGTGTGCTCACAAGCTCGCTCTTTTGGCATCGTGCTGCCTGAGAGAGAACGCGGAGGCGAGGCCAAGCATGGCTCAGTGCGTACAAACGATCGAAGAAATTCTCGTGGAGTGCGCAATGCACCTCGAAAACGTGTAA


Protein sequences

Name Description Sequence
106383

LEQATDKFNMRNLVGEGSFGQVFRGILTNGKVVAIKRMDTFAGQCAEAEKEFRIEVDLLSRMNHPHLVRLFGYCADGSQRLIVYEFMSNGSLESYFAGRCLYRSGFKLDFRRRLLISLGCAKGLAFLHAGGEDGDPIVHRDFKSSNILLDSYFSAKISDFGFAKLLQRNQSHASTRVIGTFGYFDPHYTATGRLTVKADVYSFGVVLLQLLTGKPAVVSFGGDDVPQNIVSWAEPCLNDKRKLRRILDKDLGSTYPPKCAHKLALLASCCLRENAEARPSMAQCVQTIEEILVECAMHLENV*

Domains

Domain Start-End Description Sequence

Gene3D: G3DSA:3.30.200.20
1-72 G3DSA:3.30.200.20

LEQATDKFNMRNLVGEGSFGQVFRGILTNGKVVAIKRMDTFAGQCAEAEKEFRIEVDLLSRMNHPHLVRLFG

superfamily: SSF56112
IPR011009
1-297 Kinase_like
Protein kinase-like domain

LEQATDKFNMRNLVGEGSFGQVFRGILTNGKVVAIKRMDTFAGQCAEAEKEFRIEVDLLSRMNHPHLVRLFGYCADGSQRLIVYEFMSNGSLESYFAGRCLYRSGFKLDFRRRLLISLGCAKGLAFLHAGGEDGDPIVHRDFKSSNILLDSYFSAKISDFGFAKLLQRNQSHASTRVIGTFGYFDPHYTATGRLTVKADVYSFGVVLLQLLTGKPAVVSFGGDDVPQNIVSWAEPCLNDKRKLRRILDKDLGSTYPPKCAHKLALLASCCLRENAEARPSMAQCVQTIEEILVECAM

HMMPanther: PTHR24420
1-292 PTHR24420,FAMILY NOT NAMED

LEQATDKFNMRNLVGEGSFGQVFRGILTNGKVVAIKRMDTFAGQCAEAEKEFRIEVDLLSRMNHPHLVRLFGYCADGSQRLIVYEFMSNGSLESYFAGRCLYRSGFKLDFRRRLLISLGCAKGLAFLHAGGEDGDPIVHRDFKSSNILLDSYFSAKISDFGFAKLLQRNQSHASTRVIGTFGYFDPHYTATGRLTVKADVYSFGVVLLQLLTGKPAVVSFGGDDVPQNIVSWAEPCLNDKRKLRRILDKDLGSTYPPKCAHKLALLASCCLRENAEARPSMAQCVQTIEEIL

ProfileScan: PS50011
IPR000719
8-292 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FNMRNLVGEGSFGQVFRGILTNGKVVAIKRMDTFAGQCAEAEKEFRIEVDLLSRMNHPHLVRLFGYCADGSQRLIVYEFMSNGSLESYFAGRCLYRSGFKLDFRRRLLISLGCAKGLAFLHAGGEDGDPIVHRDFKSSNILLDSYFSAKISDFGFAKLLQRNQSHASTRVIGTFGYFDPHYTATGRLTVKADVYSFGVVLLQLLTGKPAVVSFGGDDVPQNIVSWAEPCLNDKRKLRRILDKDLGSTYPPKCAHKLALLASCCLRENAEARPSMAQCVQTIEEIL

HMMPfam: PF00069
IPR000719
11-287 Pkinase,Ser-thr
Protein kinase, catalytic domain

RNLVGEGSFGQVFRGILTNGKVVAIKRMDTFAGQCAEAEKEFRIEVDLLSRMNHPHLVRLFGYCADGSQRLIVYEFMSNGSLESYFAGRCLYRSGFKLDFRRRLLISLGCAKGLAFLHAGGEDGDPIVHRDFKSSNILLDSYFSAKISDFGFAKLLQRNQSHASTRVIGTFGYFDPHYTATGRLTVKADVYSFGVVLLQLLTGKPAVVSFGGDDVPQNIVSWAEPCLNDKRKLRRILDKDLGSTYPPKCAHKLALLASCCLRENAEARPSMAQCVQT

PatternScan: PS00107
IPR017441
14-36 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

VGEGSFGQVFRGILTNGKVVAIK

Gene3D: G3DSA:1.10.510.10
73-286 G3DSA:1.10.510.10

YCADGSQRLIVYEFMSNGSLESYFAGRCLYRSGFKLDFRRRLLISLGCAKGLAFLHAGGEDGDPIVHRDFKSSNILLDSYFSAKISDFGFAKLLQRNQSHASTRVIGTFGYFDPHYTATGRLTVKADVYSFGVVLLQLLTGKPAVVSFGGDDVPQNIVSWAEPCLNDKRKLRRILDKDLGSTYPPKCAHKLALLASCCLRENAEARPSMAQCVQ

PatternScan: PS00108
IPR008271
137-149 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IVHRDFKSSNILL






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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