PRGDB00182512 (77404)

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77404
Gene Type Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Selaginella moellendorffii

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PDI-like 1-4 (best arabidopsis hit)

DNA Sequence

TTCGAGTTTCCTTTGCTCCAGGCAGCAACTAGCAATTTCGGTACTGCCAACTTGTTAGGAGAGGGCGGCTCTGGACGCGTTTACAAGGCACGACTAGACGACGACTGTTTTGCGGCAGTTAAATTATTGTTTAGCGAGGGGAAACAAGCGGAACAAGGATTCCAGGCTGAGGTTGAACTCTTGAGTGGGATTCGCCATCCGAATCTCGTCTCCTTGCTAGGATTTTCCAGCCACGGAGATCAGCGGCTTCTGGTGTACGAGTATATGCAGAATGGATCTTTGCAAGATCAACTCCATGGTCCTCTAAAGGGATCGATTCTTTCGTGGCACCTGAGAATGAAAATCGCACTTGACTCGGCAAGAGGTTTGGAACACTTGCACGAGCACTGCAACCCTCTTGTAATCCATCGGGATTTTAAATCGTCCAACATCCTTTTGGACGCAAGCTTTAATGCCAAAGTTGCGGACTTTGGGCTTGCACTGTCTGCTCCAACTGGAATCAGGCAGGACGAGATCGTTCGGGGAACTCTTGGCTATGTTGCCCCGGAATACATCCTGAATGGGAGCCTCACGGAGAAAAGTGATGTGTATGCATTCGGAGTTGTTCTTCTGGAGCTTATAACTGGGAGAAAGCCGATCGATCCATCCATGCCAACGGGATCTGAGTCGCTAGTTACTTGGGTTCTGCCGCTCTTGGGGGATCGAGCATCGTTGCCAACGGTGATAGATCCTGTTCTCCAAGGAACCGTGGATACAAAGCATCTCCATCAGGTTGCTGCAGTAGCAATGCTGTGTGTGCAAGCAGAGCCGAGTTATAGGCCACTCATTGCGGATGTTGTGAATTCCTTGATCCCGCTCGTTCCGATTGAGCTGGGAGGGACATTGCGTGTTGCAGAGACGGTGCTCGAGAACAAGTCATTTGCGGCATTGCAATGGAACGTATCCTCCAATGACTCCATTGTATATGGGGAGGATGCTTACTAA


Protein sequences

Name Description Sequence
77404 PDI-like 1-4 (best arabidopsis hit)

FEFPLLQAATSNFGTANLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLGFSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPSMPTGSESLVTWVLPLLGDRASLPTVIDPVLQGTVDTKHLHQVAAVAMLCVQAEPSYRPLIADVVNSLIPLVPIELGGTLRVAETVLENKSFAALQWNVSSNDSIVYGEDAY*

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
1-283 Kinase_like
Protein kinase-like domain

FEFPLLQAATSNFGTANLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLGFSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPSMPTGSESLVTWVLPLLGDRASLPTVIDPVLQGTVDTKHLHQVAAVAMLCVQAEPSYRPLIADVVNSL

HMMPanther: PTHR24420:SF449
1-291 PTHR24420:SF449,SUBFAMILY NOT NAMED

FEFPLLQAATSNFGTANLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLGFSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPSMPTGSESLVTWVLPLLGDRASLPTVIDPVLQGTVDTKHLHQVAAVAMLCVQAEPSYRPLIADVVNSLIPLVPIEL

HMMPanther: PTHR24420
1-291 PTHR24420,FAMILY NOT NAMED

FEFPLLQAATSNFGTANLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLGFSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPSMPTGSESLVTWVLPLLGDRASLPTVIDPVLQGTVDTKHLHQVAAVAMLCVQAEPSYRPLIADVVNSLIPLVPIEL

Gene3D: G3DSA:3.30.200.20
2-74 G3DSA:3.30.200.20

EFPLLQAATSNFGTANLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLG

ProfileScan: PS50011
IPR000719
13-287 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FGTANLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLGFSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPSMPTGSESLVTWVLPLLGDRASLPTVIDPVLQGTVDTKHLHQVAAVAMLCVQAEPSYRPLIADVVNSLIPLV

HMMPfam: PF00069
IPR000719
17-216 Pkinase,Ser-thr
Protein kinase, catalytic domain

NLLGEGGSGRVYKARLDDDCFAAVKLLFSEGKQAEQGFQAEVELLSGIRHPNLVSLLGFSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPS

PatternScan: PS00107
IPR017441
19-41 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

LGEGGSGRVYKARLDDDCFAAVK

Gene3D: G3DSA:1.10.510.10
75-279 G3DSA:1.10.510.10

FSSHGDQRLLVYEYMQNGSLQDQLHGPLKGSILSWHLRMKIALDSARGLEHLHEHCNPLVIHRDFKSSNILLDASFNAKVADFGLALSAPTGIRQDEIVRGTLGYVAPEYILNGSLTEKSDVYAFGVVLLELITGRKPIDPSMPTGSESLVTWVLPLLGDRASLPTVIDPVLQGTVDTKHLHQVAAVAMLCVQAEPSYRPLIADV

PatternScan: PS00108
IPR008271
134-146 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

VIHRDFKSSNILL






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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