PRGDB00182521 (99707)

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99707
Gene Type Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Selaginella moellendorffii

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Protein kinase superfamily protein (best arabidopsis hit)

DNA Sequence

TCGAGCTGGAGGATCTTCACATTCAAGGAACTTATCAATGCTACTAGCAACTTCTCGGACGATCGAAAGCTTGGAGAAGGTGGCTTTGGCAGCGTTTTTTGGGGACAACTTAGTGATGGTACTCAGATTGCAGTCAAGAGATTGAAGAACCTGACCACCACAAACGAGATGGCATTTGCGGTGGAAGTCGAGACATTGGGACGCGTCCAGCACAGAAATCTTCTAAAGCTCCGCGGCTACTGCACAGACGGCCAAGAGCGCATCATCGTCTACGATTACATGCCGAACTTGAGCCTCCTGTCACACCTCCATGGAAAGCTCGGCTCCAGCGCGTGCTTAAGCTGGCCGAAGAGGGTGAAAATCGCGATGGGATCCGCGGAAGCAATCGAATACTTGCATCACGATGCGAACCCCCACATCATCCACAGGGACGTGAAAGCCAGCAACGTTCTCATCGACGCCAACTTCGAGGCACAGATCGCCGACTTTGGCTTCGCCAAGTTCGTCCCGGAGGGAGTGACTCACATGACCACCCGAGTGAAAGGAACGCTGGGATACTTGGCCCCAGAGTACGCGATGTGGGGGAAGGTGTCCGAGAGCTGCGACGTCTACAGCTTCGGGATCCTGCTGCTGGAGCTCATCAGCGGGCGGAAGCCGATCGAGAAGATGGGGTCGGGAATGAAGCGCACCATCGTCGAGTGGGCCGCGCCGCTCGTGTTCCAGGGGAAGTTCGAGGACCTGGTGGATCCCAAGCTCCAGGGGAAGTTCAGCATGCTCCAGCTCAAGAAGCTGGTTCACGCGGCCACCTTGTGCGCGCAGAGCAATCCGGAGAACAGACCCACGATGCGAGAGGTGGTGGCCATCCTGAAAGAAAAGCGTCTAGACATGACCTCTGGGAGTTTCCGGATGGACACTGTGAAGTATAGACAAGAACTCTTGGATGAAGAAGACTAA


Protein sequences

Name Description Sequence
99707 Protein kinase superfamily protein (best arabidopsis hit)

SSWRIFTFKELINATSNFSDDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGYCTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVVAILKEKRLDMTSGSFRMDTVKYRQELLDEED*

Domains

Domain Start-End Description Sequence

superfamily: SSF56112
IPR011009
1-297 Kinase_like
Protein kinase-like domain

SSWRIFTFKELINATSNFSDDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGYCTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVVAILKEKRLDMT

HMMPanther: PTHR24420
2-292 PTHR24420,FAMILY NOT NAMED

SWRIFTFKELINATSNFSDDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGYCTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVVAILKEK

HMMPanther: PTHR24420:SF427
2-292 PTHR24420:SF427,SUBFAMILY NOT NAMED

SWRIFTFKELINATSNFSDDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGYCTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVVAILKEK

Gene3D: G3DSA:3.30.200.20
3-80 G3DSA:3.30.200.20

WRIFTFKELINATSNFSDDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGY

ProfileScan: PS50011
IPR000719
18-294 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

FSDDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGYCTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVVAILKEKRL

HMMPfam: PF00069
IPR000719
20-286 Pkinase,Ser-thr
Protein kinase, catalytic domain

DDRKLGEGGFGSVFWGQLSDGTQIAVKRLKNLTTTNEMAFAVEVETLGRVQHRNLLKLRGYCTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVV

PatternScan: PS00107
IPR017441
24-46 PROTEIN_KINASE_ATP
Protein kinase, ATP binding site

LGEGGFGSVFWGQLSDGTQIAVK

Gene3D: G3DSA:1.10.510.10
81-287 G3DSA:1.10.510.10

CTDGQERIIVYDYMPNLSLLSHLHGKLGSSACLSWPKRVKIAMGSAEAIEYLHHDANPHIIHRDVKASNVLIDANFEAQIADFGFAKFVPEGVTHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELISGRKPIEKMGSGMKRTIVEWAAPLVFQGKFEDLVDPKLQGKFSMLQLKKLVHAATLCAQSNPENRPTMREVVA

PatternScan: PS00108
IPR008271
140-152 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

IIHRDVKASNVLI






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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