PRGDB00182663 (108434)
| 108434 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_Pythozome |
| GenBank | |
| Gene Class | RLP |
| Domain Type | LRR, Ser-Thr Kinase |
| Gene Species | Selaginella moellendorffii |
DNA Sequence
ATGCTCGTCGCGGCAGTGATTGAGCTCCTCGTCCTCTGGGCGGTTCTTGGGCGAGCGGCATTGCCAGGATCCCAGACCCAGAGCCTGCTGCGCCTCCAGAAGCTCCTGGGGGATCCATCGGCGCTGGGCGGGTGGAGCGCCAACACGTCGTTTTGCTCGCTGCCGCCATCGCCGATGCTCAACGTCTCGTGCGCCTACGCGGATCAGTCGGGAACCCAGACCGTGATCTTGCTCCAGATTGTGGGTGACAAGCTTCCAATCACGGTCCGCCTCCCGGACGACTTCTCGATCATCACTCTGGCCAACACGCTCGTCAAGTTCCCCGACCTCCGCACGCTCACGCTCGTCTCCCTCGGCATCTGGGGCCTCGTCCCCGCCAGCCTCGACCACCTCCGCTCGCTCGAGCTCCTCAACCTCAGCTCCAACTTCCTCTCCGGCTCCATCCCCGACCGCTTCGCCTCCCTCGGCAGCCTCCAGTCGCTCGCCCTCGACAACAACATCCTCCGCGGGACCTTCCCCACCGCGCTCAACGTCCTCCCCAACCTCGACACCCTCCAGCTCTCGCACAACCAGATCGCCGGCACCATCCCCTCGCAAATCTCCCTCTTCGCCAGCCTCAAGACGCTCGACATGGACCACAACTTGCTCTTCGGCGCGCTCCCGGACTCCATCTCCAACATGAGGGTGGCGGAGACCATCTCCATCTCGGACAACTTCCTGGCCGGCGTCGTACCAAACTTGAGCCGGGTGGCGAGCCTGCGCACTCTCAACTTGGCCGGGAACCAGCTCGGCCCCTCCTTCCCGGGCCTCGGCCAGGGCCTCGTCTCCGCCAACCTCGAGAGGAACCGCTTCTCCGACTCCATCCCGGACAGCCTGCGCGGCCTCTCCCAGCTCAAGCTCCTCAACCTCTCGCTCAACTCCATCCCCGGGGCGCTGCCGGGATGGATCTTCTCGCTGCAAAGTTTGGAGACGCTGGTGCTGGATCACAACCGGCTGTCCGGGACTCTTCCCAGTGCTGTGACGCTGGCGAGCGGGCTGCGATACGTGGACATCTCCACGAATCTTTTGATGGGGGAGGTCCCCGCGGAGCTGCGGTCCGGGAGGATCACGTTGCATGTCGAGGAAAACTGCTTCTCCGGGCAGGAGATCCAGCTCCAGCAGCAGCAGCCGCAAGAGTATTGTCTCAAGGCGCAGAGGATGATACCGCGGCGGTGGAAAGGTGGCGTTGTAGCTGGGATCGCCGGCGGAGTCATGGCCGTGGGTGCTGCCATGGCTTTACTGCTGGTGATACTGCTGCGCTTCTCCAAGAGAGGGAAGCTCAAGCTCAAGCATGCGGCTGCTACTTGTGCGAACAACTCGTGTGCTGATACGGCCTCGGTGGGAGTTCCCGTGGAGCTCCTCCATAGCACGAGATACTTGGCTCAATCCGGGACTGTCGGAGCAACCGGACCAAACCAATGTCGGGTTTTCTCGCTGCTGGAGCTGGAAGAGGCCACGAGTCGATTCAGCCAAGGTTTACTCATTGGAGAGGGCGAGTATGGAAAGGTGTTCAGAGGAAAGCTTGACGATGGAACGCTGGTCGCGATCAAATGCCTGGTTATCGATTCGAGGCAGGAGATGAAGCAGCTCAAGGCACATTTGGAGTTCCTGTCGAGGATCCGACACAGGCACTTGGTCAGTCTCTTTGGCTACTGCCTCGAGCGAGAGAAGGATGGACCCCAGCACCGGCGGCTCTACCTCGTCTCCGAGTTCATCGATAATGGCACTCTTCGCAGCCATCTCTTCAAGCGAAAATTGAAGGAGTCTTTAACGTGGCAAAACCGGCTGGTCGCGGCTCTCGGCGCCGGCCGGGGTATACACTACCTTCACACGGGCGTCGTGCCGGGGATTTTCAACAACGACGTGAGGATCACGAACATTTTGCTGGATCACAATTTTGTAGGAAAAGTGAGCGATTTTGGATTAGCCAGGCATCCCGAGAGCGAGTCGTACCATTTCCATTCGTTTCTTCTCTCTCACTCTTTCTTTTCTTTTTTTCTTTCCAGGAAGCTGGCCACGGACAAGAGAGATGTGTATAACTTTGGACTTACATTACTCGAGATTGTTCTCGGGAGACCACCAACCGTAGACAATCCCATGGCCATGAAACCCAAAGTCCAAGAGCTCGTAAGTTCCTCCTCCTCTGTGTTTCGGACGGAGATGGTGGACTCGGCGATCTCGGGAACTTGTTCCGAGGATTCTCTGTCGACGGTGCTGGAGATTGCTGCAAAGTGCCTGTCGAGTGACCTCACCGCCAGGCCCTCGATGGAAGACGTCCTGTGGAACCTCCAATATGCAGTCCAAGTCCAAGACCAAAGATTTAGTGGAGAGTACCTCGAAGACTCCAGTGGAAGAGAATAA
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| 108434 | Leucine-rich repeat protein kinase family protein (best arabidopsis hit) | MLVAAVIELLVLWAVLGRAALPGSQTQSLLRLQKLLGDPSALGGWSANTSFCSLPPSPMLNVSCAYADQSGTQTVILLQIVGDKLPITVRLPDDFSIITLANTLVKFPDLRTLTLVSLGIWGLVPASLDHLRSLELLNLSSNFLSGSIPDRFASLGSLQSLALDNNILRGTFPTALNVLPNLDTLQLSHNQIAGTIPSQISLFASLKTLDMDHNLLFGALPDSISNMRVAETISISDNFLAGVVPNLSRVASLRTLNLAGNQLGPSFPGLGQGLVSANLERNRFSDSIPDSLRGLSQLKLLNLSLNSIPGALPGWIFSLQSLETLVLDHNRLSGTLPSAVTLASGLRYVDISTNLLMGEVPAELRSGRITLHVEENCFSGQEIQLQQQQPQEYCLKAQRMIPRRWKGGVVAGIAGGVMAVGAAMALLLVILLRFSKRGKLKLKHAAATCANNSCADTASVGVPVELLHSTRYLAQSGTVGATGPNQCRVFSLLELEEATSRFSQGLLIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEFIDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLWNLQYAVQVQDQRFSGEYLEDSSGRE* |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| HMMPanther: PTHR24420 | 1-784 | PTHR24420,FAMILY NOT NAMED | MLVAAVIELLVLWAVLGRAALPGSQTQSLLRLQKLLGDPSALGGWSANTSFCSLPPSPMLNVSCAYADQSGTQTVILLQIVGDKLPITVRLPDDFSIITLANTLVKFPDLRTLTLVSLGIWGLVPASLDHLRSLELLNLSSNFLSGSIPDRFASLGSLQSLALDNNILRGTFPTALNVLPNLDTLQLSHNQIAGTIPSQISLFASLKTLDMDHNLLFGALPDSISNMRVAETISISDNFLAGVVPNLSRVASLRTLNLAGNQLGPSFPGLGQGLVSANLERNRFSDSIPDSLRGLSQLKLLNLSLNSIPGALPGWIFSLQSLETLVLDHNRLSGTLPSAVTLASGLRYVDISTNLLMGEVPAELRSGRITLHVEENCFSGQEIQLQQQQPQEYCLKAQRMIPRRWKGGVVAGIAGGVMAVGAAMALLLVILLRFSKRGKLKLKHAAATCANNSCADTASVGVPVELLHSTRYLAQSGTVGATGPNQCRVFSLLELEEATSRFSQGLLIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEFIDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLWNLQYAVQVQD |
| HMMPanther: PTHR24420:SF465 | 1-784 | PTHR24420:SF465,SUBFAMILY NOT NAMED | MLVAAVIELLVLWAVLGRAALPGSQTQSLLRLQKLLGDPSALGGWSANTSFCSLPPSPMLNVSCAYADQSGTQTVILLQIVGDKLPITVRLPDDFSIITLANTLVKFPDLRTLTLVSLGIWGLVPASLDHLRSLELLNLSSNFLSGSIPDRFASLGSLQSLALDNNILRGTFPTALNVLPNLDTLQLSHNQIAGTIPSQISLFASLKTLDMDHNLLFGALPDSISNMRVAETISISDNFLAGVVPNLSRVASLRTLNLAGNQLGPSFPGLGQGLVSANLERNRFSDSIPDSLRGLSQLKLLNLSLNSIPGALPGWIFSLQSLETLVLDHNRLSGTLPSAVTLASGLRYVDISTNLLMGEVPAELRSGRITLHVEENCFSGQEIQLQQQQPQEYCLKAQRMIPRRWKGGVVAGIAGGVMAVGAAMALLLVILLRFSKRGKLKLKHAAATCANNSCADTASVGVPVELLHSTRYLAQSGTVGATGPNQCRVFSLLELEEATSRFSQGLLIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEFIDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLWNLQYAVQVQD |
| superfamily: SSF52058 | 19-366 | SSF52058,LRR | AALPGSQTQSLLRLQKLLGDPSALGGWSANTSFCSLPPSPMLNVSCAYADQSGTQTVILLQIVGDKLPITVRLPDDFSIITLANTLVKFPDLRTLTLVSLGIWGLVPASLDHLRSLELLNLSSNFLSGSIPDRFASLGSLQSLALDNNILRGTFPTALNVLPNLDTLQLSHNQIAGTIPSQISLFASLKTLDMDHNLLFGALPDSISNMRVAETISISDNFLAGVVPNLSRVASLRTLNLAGNQLGPSFPGLGQGLVSANLERNRFSDSIPDSLRGLSQLKLLNLSLNSIPGALPGWIFSLQSLETLVLDHNRLSGTLPSAVTLASGLRYVDISTNLLMGEVPAELRS |
| Gene3D: G3DSA:3.80.10.10 | 101-268 | G3DSA:3.80.10.10 | ANTLVKFPDLRTLTLVSLGIWGLVPASLDHLRSLELLNLSSNFLSGSIPDRFASLGSLQSLALDNNILRGTFPTALNVLPNLDTLQLSHNQIAGTIPSQISLFASLKTLDMDHNLLFGALPDSISNMRVAETISISDNFLAGVVPNLSRVASLRTLNLAGNQLGPSFP |
| ProfileScan: PS51450 IPR001611
|
133-156 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLELLNLSSNFLSGSIPDRFASLG |
| HMMPfam: PF00560 IPR001611
|
133-155 | LRR_1 Leucine-rich repeat
|
SLELLNLSSNFLSGSIPDRFASL |
| ProfileScan: PS51450 IPR001611
|
157-180 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLQSLALDNNILRGTFPTALNVLP |
| ProfileScan: PS51450 IPR001611
|
181-203 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
NLDTLQLSHNQIAGTIPSQISLF |
| ProfileScan: PS51450 IPR001611
|
205-227 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLKTLDMDHNLLFGALPDSISNM |
| ProfileScan: PS51450 IPR001611
|
252-274 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLRTLNLAGNQLGPSFPGLGQGL |
| Gene3D: G3DSA:3.80.10.10 | 274-381 | G3DSA:3.80.10.10 | LVSANLERNRFSDSIPDSLRGLSQLKLLNLSLNSIPGALPGWIFSLQSLETLVLDHNRLSGTLPSAVTLASGLRYVDISTNLLMGEVPAELRSGRITLHVEENCFSGQ |
| HMMPfam: PF13855 | 278-332 | LRR_8,Leucine rich repeat | NLERNRFSDSIPDSLRGLSQLKLLNLSLNSIPGALPGWIFSLQSLETLVLDHNRL |
| ProfileScan: PS51450 IPR001611
|
297-319 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
QLKLLNLSLNSIPGALPGWIFSL |
| ProfileScan: PS51450 IPR001611
|
321-343 | LRR,Leucine-rich repeat profile. Leucine-rich repeat
|
SLETLVLDHNRLSGTLPSAVTLA |
| superfamily: SSF56112 IPR011009
|
472-784 | Kinase_like Protein kinase-like domain
|
YLAQSGTVGATGPNQCRVFSLLELEEATSRFSQGLLIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEFIDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLWNLQYAVQVQD |
| Gene3D: G3DSA:3.30.200.20 | 484-584 | G3DSA:3.30.200.20 | PNQCRVFSLLELEEATSRFSQGLLIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEF |
| ProfileScan: PS50011 IPR000719
|
502-779 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
FSQGLLIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEFIDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLWNLQYA |
| HMMPfam: PF07714 IPR001245
|
507-774 | Pkinase_Tyr Serine-threonine/tyrosine-protein kinase catalytic
|
LIGEGEYGKVFRGKLDDGTLVAIKCLVIDSRQEMKQLKAHLEFLSRIRHRHLVSLFGYCLEREKDGPQHRRLYLVSEFIDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLW |
| PatternScan: PS00107 IPR017441
|
508-530 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGEGEYGKVFRGKLDDGTLVAIK |
| Gene3D: G3DSA:1.10.510.10 | 585-780 | G3DSA:1.10.510.10 | IDNGTLRSHLFKRKLKESLTWQNRLVAALGAGRGIHYLHTGVVPGIFNNDVRITNILLDHNFVGKVSDFGLARHPESESYHFHSFLLSHSFFSFFLSRKLATDKRDVYNFGLTLLEIVLGRPPTVDNPMAMKPKVQELVSSSSSVFRTEMVDSAISGTCSEDSLSTVLEIAAKCLSSDLTARPSMEDVLWNLQYAV |
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