PRGDB00182772 (107037)

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107037
Gene Type Putative_R-Genes,_predicted_from_Pythozome
GenBank
Gene Class Unknown
Domain Type Ser-Thr Kinase
Gene Species Ectocarpus siliculosus

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PAS domain-containing protein tyrosine kinase family protein (best arabidopsis hit)

DNA Sequence

ATGCTGCTGGTCACCCATGCGAGTCCGCCAGATGCTGGCTGCTGCCTGTCCATCCATCCAACATCTATAGCCGCATGGTTAATATGCCTAATCACTGCTGGATGCAACCGCTCACCCTTGCATGTCCTTCCCTGGTACGGCTATTCCGCTTACCCCCCTACTACTGCAATACCAGAAGTTGGAGCGGAACCAGGGGAAGTGCAACCTGGCGAGCAGGAGGAGGTGGTCGGCACCAGGCCGACCGTGGTGACGCATCTGGAACAGGCTGCTGTGGTCATTACCCTAGGCACGCGGCCACAACCCAACCTGGAGCTGCGTGTGCGGTTAGTGGACCCCGGTGCTGATGCTGAGGCTGGCGACAGCAGCAACAGTCCCACAGCAGGTGCCGTCACGGGTGTCGTACCCCTGCACTCGAAGGAGGAGGAGGTCAGCGGCAGTGGCAGCGGCAGTGCGGGTGGTGCTCCTCCCTGTACTGGTAGCAATGTGGTGGAGCTGTCCTCGGTGGTACGCGGCAAGGGCACCTTTGGTCGAGTGGTGGAAGGTACTTACCGGGGACAGCGAGTGTCTGTGAAGCTTCTGGCCAGCAACGGGCCCTGGGGTTGCCCCATCGAGGCCTTTGCCTCCAGCTTTGCGCAGGAAGTGCAGGTGCTGAGCCGCTGTTATCACCCAAATGTTGTGCGATTGCTGGCGGCCTGTGTGGAGTCGCCGCGGCTATGTTTGGTTCTGGAGCTTATGGAGACTTCTCTGGATTGCCTTATGTACGGAGACCCGACAGCCCCGCCAATGCCGCTGCCGAAGGTGCTTCATATCGCCATATCCATTGCCAACGCGCTGGCCTACCTGCACCCCACCATCACTCACCGAGACCTCAAGCCTGCCAACGTGCTGCTCAACGACCCCCACAGCGACCGGCCCACAGTTAAGCTTGCGGACTTTGGGCTGTCGCGGCTTCGTGTGACGGTGGCTCCAACGGAGCATCCGAATGCGGGCACGCCCGCGTACATGGCACCGGAGTGCTTCGACTTGCAAAACCGTCAGGTCACACATAAAGCGGACATGTTCGCGCTGGGTGTGCTGCTGTGGGAGATGCTGGCCTGCGAGAGGCCCTGGCCTGGAATGAGCCCGCTGGAAATCGGCCTGCTGGTAGCGTTCAACGGTATGCGCCTTTCCCTGGATGAACTCCTGGCCTCCGAGCGCTGCCCATCCAAGCTGGGTCGTCTGCTGCTAGCCTGCTGGGAGACGGATCCTGACCGGCGGCCAGCGGCTGCAGAGGCAAGCAAGGAGCTGGCGTTGATCCTGCAACTTCAGCAGCAACCGCAGGAACAGCAGCTGCAGCCACCATCCCTGGTCAACCCGCCTGCCCTGCAGCAAGCTCGGCAGCTTCAATGCAATCAGCAGCTGGCGCGCGGACCGCAGCAGTCCAATGTCCGGGCACAGCTCACGGATACCAGCGAGGTGGACCTTTGGGGTGATCCCTCATCTTCCAATTCATTCCCACAAACAGGAGGAGCAGCTCGAGGAGCAGCAGCAGCAGTGGCCTAG


Protein sequences

Name Description Sequence
107037 PAS domain-containing protein tyrosine kinase family protein (best arabidopsis hit)

MLLVTHASPPDAGCCLSIHPTSIAAWLICLITAGCNRSPLHVLPWYGYSAYPPTTAIPEVGAEPGEVQPGEQEEVVGTRPTVVTHLEQAAVVITLGTRPQPNLELRVRLVDPGADAEAGDSSNSPTAGAVTGVVPLHSKEEEVSGSGSGSAGGAPPCTGSNVVELSSVVRGKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELMETSLDCLMYGDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASKELALILQLQQQPQEQQLQPPSLVNPPALQQARQLQCNQQLARGPQQSNVRAQLTDTSEVDLWGDPSSSNSFPQTGGAARGAAAAVA*

Domains

Domain Start-End Description Sequence

ProfileScan: PS50011
IPR000719
164-431 PROTEIN_KINASE_DOM
Protein kinase, catalytic domain

ELSSVVRGKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELMETSLDCLMYGDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASKELAL

HMMPanther: PTHR23257:SF325
169-459 PTHR23257:SF325

VRGKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELMETSLDCLMYGDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASKELALILQLQQQPQEQQLQPPSLVNPPALQQAR

HMMPanther: PTHR23257
169-459 PTHR23257,Ser-thr,SERINE-THREONINE PROTEIN KINASE

VRGKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELMETSLDCLMYGDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASKELALILQLQQQPQEQQLQPPSLVNPPALQQAR

superfamily: SSF56112
IPR011009
171-437 Kinase_like
Protein kinase-like domain

GKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELMETSLDCLMYGDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASKELALILQLQQ

HMMPfam: PF00069
IPR000719
171-427 Pkinase,Ser-thr
Protein kinase, catalytic domain

GKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELMETSLDCLMYGDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASK

Gene3D: G3DSA:3.30.200.20
171-246 G3DSA:3.30.200.20

GKGTFGRVVEGTYRGQRVSVKLLASNGPWGCPIEAFASSFAQEVQVLSRCYHPNVVRLLAACVESPRLCLVLELME

Gene3D: G3DSA:1.10.510.10
255-460 G3DSA:1.10.510.10

GDPTAPPMPLPKVLHIAISIANALAYLHPTITHRDLKPANVLLNDPHSDRPTVKLADFGLSRLRVTVAPTEHPNAGTPAYMAPECFDLQNRQVTHKADMFALGVLLWEMLACERPWPGMSPLEIGLLVAFNGMRLSLDELLASERCPSKLGRLLLACWETDPDRRPAAAEASKELALILQLQQQPQEQQLQPPSLVNPPALQQARQ

PatternScan: PS00108
IPR008271
285-297 PROTEIN_KINASE_ST
Serine/threonine-protein kinase, active site

ITHRDLKPANVLL






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Analyses

Blast

Blast matches against Reference R-Genes. Show


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