PRGDB00186624 ()

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Gene Type Putative_R-Genes,_collected_from_NCBI_Protein
GenBank 335355786 (HM446518)
Gene Class NL
Domain Type NBS, LRR
Gene Species Mangifera indica

Comment?

Mangifera indica NBS-LRR disease resistance protein (MRNBS12) gene, exon and partial cds.

DNA Sequence

GGTATGGGTGGTATTGGTAAGACTACTCTTGCTACTACTGTATTCAACAAAATCTTTGGGCAGTTTGAAGCTTCTTATTTCATTGAAAATATTAGAGAAGAATTAGAGAAAAGTAGGGGATTAAATGACATGCGCCAAAAACTCAGTCATGCACTTTTAGGGGATATACATCCCAATATTGGATTCATCTTCCCAAGAGAAAGACTTAGCCGTAAGAAAGTTCTGATTGTCCTGGATGATGTATGG


Protein sequences

Name Description Sequence
NBS-LRR disease resistance protein NBS-LRR disease resistance protein, partial [Mangifera indica].

GMGGIGKTTLATTVFNKIFGQFEASYFIENIREELEKSRGLNDMRQKLSHALLGDIHPNIGFIFPRERLSRKKVLIVLDDVW


Domains

Domain Start-End Description Sequence

HMMPfam: PF00931
IPR002182
1-82 NB-ARC,NBS
NB-ARC

GMGGIGKTTLATTVFNKIFGQFEASYFIENIREELEKSRGLNDMRQKLSHALLGDIHPNIGFIFPRERLSRKKVLIVLDDVW

HMMPanther: PTHR11017:SF20
1-82 PTHR11017:SF20,SUBFAMILY NOT NAMED

GMGGIGKTTLATTVFNKIFGQFEASYFIENIREELEKSRGLNDMRQKLSHALLGDIHPNIGFIFPRERLSRKKVLIVLDDVW

superfamily: SSF52540
1-82 SSF52540

GMGGIGKTTLATTVFNKIFGQFEASYFIENIREELEKSRGLNDMRQKLSHALLGDIHPNIGFIFPRERLSRKKVLIVLDDVW

Gene3D: G3DSA:3.40.50.300
1-80 G3DSA:3.40.50.300

GMGGIGKTTLATTVFNKIFGQFEASYFIENIREELEKSRGLNDMRQKLSHALLGDIHPNIGFIFPRERLSRKKVLIVLDD

HMMPanther: PTHR11017
1-82 PTHR11017,LEUCINE-RICH REPEAT-CONTAINING PROTEIN

GMGGIGKTTLATTVFNKIFGQFEASYFIENIREELEKSRGLNDMRQKLSHALLGDIHPNIGFIFPRERLSRKKVLIVLDDVW






List of Contributions

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Analyses

Blast

Blast matches against Reference R-Genes. Show


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