PRGDB00188301 (Gma.7801)
| Gma.7801 | |
|---|---|
| Gene Type | Putative_R-Genes,_predicted_from_NCBI_UniGene |
| GenBank | 336390562 (HQ651811) |
| Gene Class | Unknown |
| Domain Type | Ser-Thr Kinase |
| Gene Species | Glycine max |
DNA Sequence
GGAGAAGACAAGTGACAAGAGTGTGAACTGCAAAGGGCTTCTCCAGCCTAGTTTGTTCTCAGATCTTCTTCTTCCATGGACCAGTACGAGAAGGTGGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGGCTCGCGACCGCGCCACCAATGAGACAATCGCTCTGAAGAAGATTCGCCTCGAGCAGGAGGACGAAGGCGTTCCCAGCACCGCCATTCGCGAGATTTCTCTTCTCAAAGAGATGCAGCATAGGAACATTGTTAGGTTGCAGGATGTAGTGCACAGTGAGAAGCGATTGTATCTGGTTTTTGAGTATCTGGACTTGGATCTAAAAAAACACATGGATTCATCTCCAGAGTTTGTGAAAGATCCGCGGCAAGTAAAGATGTTCCTTTATCAAATTCTCTGTGGCATTGCTTACTGTCATTCACATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGTACTAATTCACTGAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGCATTCCTGTCAGGACCTTTACACATGAGGTGGTGACATTATGGTACAGAGCTCCAGAAATATTGCTTGGATCTCGTCATTATTCTACGCCAGTTGATGTTTGGTCAGTGGGATGCATATTTGCAGAGATGGTAAACAGACGACCTCTATTCCCTGGGGACTCTGAGATTGATGAATTATTTAAAATATTCAGAATCTTGGGTACCCCAAATGAAGACACATGGCCTGGAGTAACTTCATTGCCTGATTTCAAATCAACATTTCCCAAATGGCCATCCAAGGACTTAGCAAATGTGGTTCCAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTAGTATGCTTTGCTTGGATCCCAGCAAAAGAATTACCGCCAGGAGCGCTGTGGAGCATGAATACTTCAAAGACATTAAATTTGTGCCCTGATTCCATATCTTGATGGCAAACGTGTTTATAGTAATATTGTGCAGAATTTATGGGTTTTGACTCTTCGAGAAATGCGTGTTGTCTTTTGCTACTTTTTTTGTGACTTGGGGGTTGGGACTGAGTCATACTTCTATTTTTTGGTCCTTATAGAATGTTTCAGATTCAACTTGAGTGATTGATTATATTGCATATTACTTTTTCTACTACTaaaaaaaaaaaaaaaaaa
Protein sequences
| Name | Description | Sequence |
|---|---|---|
| Gma.7801 | translated coding region predicted by ESTScan from UniGene Gma.7801 | XEKTSDKSVNCKGLLQPXFVLRSSSSMDQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYFKDIKFVP |
Domains
| Domain | Start-End | Description | Sequence
|
|---|---|---|---|
| superfamily: SSF56112 IPR011009
|
16-320 | Protein kinase-like (PK-like) Protein kinase-like domain
|
QPXFVLRSSSSMDQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYFKDIKFVP |
| HMMPanther: PTHR24056:SF109 | 19-317 | SUBFAMILY NOT NAMED,SHAGGY-RELATED PROTEIN KINASE | FVLRSSSSMDQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYFKDIK |
| HMMPanther: PTHR24056 | 19-317 | FAMILY NOT NAMED,CELL DIVISION PROTEIN KINASE | FVLRSSSSMDQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYFKDIK |
| Gene3D: G3DSA:3.30.200.20 | 26-104 | no description | SMDQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYL |
| HMMSmart: SM00219 IPR020635
|
30-313 | Tyrosine kinase, catalytic domain Tyrosine-protein kinase, catalytic domain
|
YEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYF |
| ProfileScan: PS50011 IPR000719
|
30-313 | PROTEIN_KINASE_DOM Protein kinase, catalytic domain
|
YEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYF |
| HMMSmart: SM00220 IPR002290
|
30-313 | Serine/Threonine protein kinases, catalytic Serine/threonine- / dual-specificity protein kinas
|
YEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYF |
| HMMPfam: PF00069 IPR000719
|
30-313 | Pkinase,Ser-thr Protein kinase, catalytic domain
|
YEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYF |
| PatternScan: PS00107 IPR017441
|
36-59 | PROTEIN_KINASE_ATP Protein kinase, ATP binding site
|
IGEGTYGVVYKARDRATNETIALK |
| Gene3D: G3DSA:1.10.510.10 | 105-314 | no description | VFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKDLANVVPNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYFK |
| PatternScan: PS00108 IPR008271
|
149-161 | PROTEIN_KINASE_ST Serine/threonine-protein kinase, active site
|
VLHRDLKPQNLLI |
List of Contributions
There has not been any contribution yet.
